Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01994 ATGCAGCTCACTCACCTGTGCCTTATCATGCCCTCAGATTATGATAAACTAGAGCCACTTCATGCAACCCCACAAACCCCACAAAAAAAAGTTAAGGCCAAAAAACACCTTCAAGGGGCATGTGGAGGCCATGTTGTTGCTACCCTTCATGGTTCCTTTACCAGGTTGTGTGACACAAAGTGGTGGAACTGTACTAACTGGAACCTATGCCAACATGGGGCAAGAAAAACCAAGCAGATCAAGAGTAGTTCTTGTGTGTTTCATGACATGGAGGGTGTGCAACTCTCTTCCAAGATTGGAAGGGACAGCAACATTAATCCAAGGATTTTCAGCTATGCTGAGCTCTACATAGGGTCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGAAGTGGAGGGTTTGGAAAAGTGTACAAAGCTGTTATGCCTAGTGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGCAGGGAAAGGTGGCCAGTTTGAGAAGACTTTTGCAGCAGAACTAGCAGCAGTGGCACACCTTCGCCACAAGAACCTTGTTCCCTTGAGGGGTTGGTGTGTTTTTGAGGATCAGCTTTACCTGGTGTATGACTACATGCCTAATTTGAGCCTTGACCGGGTGCTATTTCGCAAGAACTTGAAGGAAGAAGAGCCACTTGGATGGGTGAGGCGTGGGAAGATTGTGAAGGGTTTGGCATGTGCATTGCACTATTTGCATGAGCAGTTGGAGACTCAAATCATTCATAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCCCACTACAATGCTAGGTTGGGGGACTTTGGCTTGGCAAGGTGGCTAGAGCATGAGCTTGAGTATGAGTATGAGACAAGGAAAGCATCTACATCAAGCAAGTTTGAGCATTTCAGGCTGAGTGAGACCACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCAGAGAGCTTCCAGAGAAGGAGCATTGCTACCTCAAAATCTGATGTGTTCAGCTTTGGGATAGTTGTGTTGGAGGTGGTGTCTGGAAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGGGAGGCTTGTTGCTGCTGGGGACACAAGGCTTATTGATGGTTCCTACAAGGTTTTTGAGATGGAGCATTTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCTCAATTGAGGCCAAGCATGAAGTGGATTGTGGAAGCACTTGCTGACATGTCAAACAAGTTGCCAACACTCCCTTCATTTCACTCCCATCCTATGTACATCTCTTTGTCCTCCTCTTCTGAGACTAGTCCAAACAGCACAAAAGGCACTGGCTCAAGCTCAGGAACAGCAAGTACTAATAGCAATCATACTAGTTCCATTTCCAAATTTGTCACAGCCACAGGAGAGACTATATATGTAACTGCTGAAGCTGAACACAGAAACAGTGGAACTGGCTCTTCTAAGAGTTGCAAGAGAATGATCCATCAAAAGCCATCATTTGTTGAAACGCCTAGGGAGATACCATACAAGGAGATTGTTTCAGCCACAGATAACTTCTCAGAGACCAAAAGGGTGGCTGAGCTAGACTTTGGAACTGCATACCATGGCATCCTTGATGGCCACTACCATGTCATGGTGAAACGCCTTGGCTTGAAGACGTGCCCTGCATTGCGCCAAAGATTCTCCAATGAGCTAAGGAACTTGGCAAAACTTCGCCACAGGAATTTGGTGCAGCTCAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAGAAGATTTCTTAGTCACCAACTTCACCATCATAACAATGGCACTAAAAATGGTAATTCTATCCTTAAATGGCATCATAGGTATAGCATAGTGAAATCACTTGCATCTGCTCTTCTCTATCTGCATGAGGAATGGGATGAACAAGTCATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCCAGACTAGGTAGTTTTGCTCTGGCTGAGTTTTTGATAAGGAATGAGCATGGCCATCATGTAATCACCACCAGGAGCAAGTCGGTTTGTGGGATTTTCGGCTACATGTCACCGGAGTATGTGGAATCTGGCGAGGCAACCACGGCTGCTGATGTTTATAGTTTTGGTGTTGTGGTGCTTGAGATTGTAAGTGGATTTAAGGCTGTGGATTTTAGGCAACCTGAGGTGCTATTGGTAAAGAAGGTTCATGAATTTGAGATGAGAAAGAGACCACTTGAGGCATTAGCAGATATAGGACTAAATGGAGAGTACAATTATAAGGAACTAATGAGATTGGTAAGCTTAGGAGTTGCATGCACCCGTTCTGACCCAAAATTAAGACCAAGCACTAGACAGATAGTAAGCATCCTTGATGGAAATGACAAATTAATCATGGGGGAGAACATGGAGAGCAGGGAAGATTGGAGAGAAAGTAATGCCTGCTCTTTGTCACTGGTTAAGAGAATCCAAGCTCTAGGCATACAATGA 2547 0.455 MQLTHLCLIMPSDYDKLEPLHATPQTPQKKVKAKKHLQGACGGHVVATLHGSFTRLCDTKWWNCTNWNLCQHGARKTKQIKSSSCVFHDMEGVQLSSKIGRDSNINPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNLSLDRVLFRKNLKEEEPLGWVRRGKIVKGLACALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKASTSSKFEHFRLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVSGRRAIDLTYPDEKIILLDWVRRLSDEGRLVAAGDTRLIDGSYKVFEMEHLIHISLLCTLHDPQLRPSMKWIVEALADMSNKLPTLPSFHSHPMYISLSSSSETSPNSTKGTGSSSGTASTNSNHTSSISKFVTATGETIYVTAEAEHRNSGTGSSKSCKRMIHQKPSFVETPREIPYKEIVSATDNFSETKRVAELDFGTAYHGILDGHYHVMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLHHHNNGTKNGNSILKWHHRYSIVKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLIRNEHGHHVITTRSKSVCGIFGYMSPEYVESGEATTAADVYSFGVVVLEIVSGFKAVDFRQPEVLLVKKVHEFEMRKRPLEALADIGLNGEYNYKELMRLVSLGVACTRSDPKLRPSTRQIVSILDGNDKLIMGENMESREDWRESNACSLSLVKRIQALGIQ 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01994 848 FunFam Receptor like protein kinase S.2 607 833 - -
Pumo7g01994 848 FunFam Receptor like protein kinase S.2 491 605 - -
Pumo7g01994 848 ProSitePatterns Protein kinases ATP-binding region signature. 128 157 IPR017441 GO:0005524
Pumo7g01994 848 SUPERFAMILY Protein kinase-like (PK-like) 509 811 IPR011009 -
Pumo7g01994 848 FunFam Receptor like protein kinase S.2 200 423 - -
Pumo7g01994 848 SUPERFAMILY Protein kinase-like (PK-like) 104 444 IPR011009 -
Pumo7g01994 848 MobiDBLite consensus disorder prediction 441 467 - -
Pumo7g01994 848 Gene3D Phosphorylase Kinase; domain 1 490 605 - -
Pumo7g01994 848 SMART serkin_6 122 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01994 848 FunFam Receptor like protein kinase S.2 93 199 - -
Pumo7g01994 848 Pfam Protein kinase domain 123 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01994 848 PANTHER - 83 418 - -
Pumo7g01994 848 Gene3D Transferase(Phosphotransferase) domain 1 611 832 - -
Pumo7g01994 848 Gene3D Transferase(Phosphotransferase) domain 1 200 425 - -
Pumo7g01994 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pumo7g01994 848 Gene3D Phosphorylase Kinase; domain 1 96 199 - -
Pumo7g01994 848 ProSiteProfiles Protein kinase domain profile. 122 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01994 848 Pfam Protein tyrosine and serine/threonine kinase 533 809 IPR001245 GO:0004672|GO:0006468
Pumo7g01994 848 ProSiteProfiles Protein kinase domain profile. 529 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01994 Pumo-Chr7 53619272 53622364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01994 498 811 Receptor kinase-like Gene Family AT5G55830 34.906 2.79e-50 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo7g01994 PK_Tyr_Ser-Thr 3.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01994 - - gmx:100781955 1533.85