Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01993 ATGTCCTTCAATCAATCAAAGTCGGAGAAGAACGACGCGGTTTACCGAAAAACCGGGCGATCCTCCAGCTTCAATCAGCAGAGAGGCTCCTACGGTAGGGGTGGCGGCAGCGGTGGCGGGACCGCGCCGTCGAGCAATTCATTCTCCTATAGCCGGAGTTTTAGCAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGCTAAACCCCCCAGGGCATTCAACAGAGTCCACTAGTGCATCTACTGCCCAAACCATTAACAATGGTACCCATGTACAGCCACAATTACATGGAGCATCAGATGGGCCAGTTACAAAGTCATCTGAATCATCAACTGCACATAGGAGTGCTGGAATTCTTCCGAAGGCTCCAACTTCTCTACAGCCCCCCTTGATTTCTGATCCAGTCCCTCCCACAAGCCCTGCTAAGGGAGATGCGTCTAATAAGGCATTCCCTTTTCAATTTGGATCCATCGCTCCTAGCTTTATTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACTCTTACAAATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCCGGTGTCACTGAGCAATCTAATGCTGGGGAGAGCCGGGATACTCATATAGGGGGAACTAAGGCAAAAAAGGATCCTCAGGTCCCAGCAAGCCAGATGCCAAAGCCCTCCTCTGTTCCTGTATCTGGGATTTCAATGTCAACTCCATATCACCAGTCACAGTCTCCTTTACAGTTTGGTGGTGCTAATCCACAGATTCAATCTCAGGGTATGTCAACGGCATCCCTCCATATGCCTATACCGATGCCTTTACCAATTGTCAATGCTACACAAGTGCAACAGCCAGTTTTTGTCCCAGGTCTTCAACCTCATCCAATGCATCCTCAGGGGATCATGCATCAAGGCCAAAACATGAGTTTTGCTCCTCAAATGGGTCATCAGTTACCACATCAATTAGGCAGCATGGGCATTGGCATCGGCCCGCAATATCCCCAGCAGCAAGGAGGAAAATTTGCTGGTCCTCGAAAAACTACTCCTGTAAAGATAACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGGCTTCTCATCCTGTGAACTATTATTCTTCCAGCTCATATAATACCAATTCTCTCTATTATCCACCTAGTTCTCTTCCATTAACAAGTAGCCCGATATCTCCTAATTCTCAGCCACCAATATTTAATTATCCTGTGAACCATGGTCCACAAGGTGCGAGTTTCATGAATTCATCATCGCTTGGTACCCTGCCTATTAATAAAGCTAGCACTCCAACAGGGGTTGCGTCTCTGAACATTAAGCCAAGTGGTACGTCTGCTATTGTGGACTCAACTGCATCTTGTGATGCTAGCTCCTCTGTGCTGCAAAAAGGGTCTGAAACTTGTTCAGAAATCTCTTTACAACAGTCTAAGTTGTCTAGTGATTCTGTCCCAGTTGTGTCTAATAATGAAGGTGGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAAGAAACCAGGGAAGAAAGGTCCATTATCACAGCATCAGGTTTCTGTACAATCTCCCACAACGGATAATGTGCCTTCTCGTGCTGTTGACCATGGTATATCTAATACTGGAGTTTCCGAACCTGTAGGAACTAAAACAAACCATTCTGCGGAAATTACCACTGAAGATCTTCCAACATCTGATACAATACCTAGTAGCATTTCTACTGCTGTTGAAGTGAAAACCAATGGGTCTGCTGAAGTTTCTGCTTGTGTTTCAGCTGAAGGATCTGGTGCACAAACTATTGACAGAGTGCACAATCATAATCCTGATAAGATAGATAAATTAGCTGAAGGAAATTCTGGCACATCAGATCTGCAGTCTGCTGATCTTCCAGAAACAACATCAAAGCGTGTCAAGGATGGCTCGGAGAATACTGGCGGTGAGTCAGGTACCAAGGAAAGACCAATTATAGAACCAAATAAGGCAAAAACTACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCGGCTGGGTCAATGTCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAGTTGTCTTAAGTTCTGAGAGCACAGAAGGTGCTACTACTCAAAGTTTGAAGCAGTTGCCAAAAGATGCTGCTCAGTCAGATGCTTTAGCAAGTGAAAAATGTGGTCAAAGTAAAGCTGAACTCGATGACTGGGAGGATGCTGCTGACATGTCTACCCCCAAACTGGAGGTTCATGATAAATCACAAGTTGGTGATGGAAGTGGAAGTACAGCCAAAAAGTATTCACGTGATTTCCTTCTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAGATTTTGAAGTCACCACAGACATTGAAGCTTTGATGAGTGCCAATATTGGTAGTTCTCATGTTTTTGAGCGTGATTCACATGCTAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGGATGGATCGCCGTGGGGATGTGGTAATGGAGGATGACAGATGGAGTAAAGTTTCTGGTGCTTTTCGTTCTGGACGTGGTTTGGATGGCATTGGAGGTAATGTGGGATTTCGATCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAGACACCACCACAATATGCTGGAGGGATCCTTTCTGGGCCAATGCAATCGGTGGGAAATCATGGTGGAAGAAATAACCCTGATGGGGAGAGGTGGCAGCGTTCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAATAAGTATGAAGTGGGTAAAGTAACAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAGGCTATCTTGAACAAACTAACTCCGCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCAGATTTTAGTGAGGACAATGAAAAGATAACTTTTAAAAGGTTACTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAACAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTGCCGAGGAAAGGGAAGAAAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACGGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTTACAGGATCCAGATGAAGAAGACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGAGTGAGGTTCATGTTGAAAGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAGGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCCGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGTCGGGTCGTGGTCTTGGCAACAATCAATCAGCAAGAAGGAATCCCATGGATTTTGGTCCAAGAGGATCATCTATGTTGTCTCCCAATTCTCAAATGGGTGGCCTGCGTGGTCTTCCTACTCAAGTTCGTGGGTATGGTGCTTCTCAGGATGCTCGATTTGAGGAACGACAATCTTATGAGGCTAGGACCTTGTCAGTTCCTTTGCCTCAAAGACCCTTAGGAGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATTGACAGCAATTTCCAATTTGCCAATATCTGATGCGCATCATGTCCCTGGAGATTCTCATAGAATGACTACAGGTCTTAATGGTCACAGCAATTTATCAGAGCGCACACCATATAGCTCAAGGGAGGATCTTGTGTCAAGATATGGTACTGATAGGCCTTCAGGTCCATCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATGTAAACCATGGTAACAGAGACTTGAGGAGTGCAGATCGGAATCTTGAACCTCCTGCTCAATTGCAAGGGTCAACAGTCTCTCAGAATGCTTCTTCAGAGAAGATATGGCCAGAAGAACGACTGAGGGACATGTCCTTGTCAGCAATAAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTTTCTCTGTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCCAAACTACTTGTGAACCTTGTGAAATCTCAGCATGGCACCTTGAGTCAAGTCCACCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCGAAAGCCATAACAGAGAGTGTAGTTACTTTGAAGGAGATTGGGCAGTTGATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGTACGTTGGAGGTGATTCAAAGCGAGAAGGGGGACGCGGTTCTAAACGAGATCCGTTCAAGCTCTAACTTAAGGTTGGAAACTTTCCGGCCACCTAATGCCAAAACATCAAGGAAGTTGGAAAATTTTATTTAG 4977 0.4463 MSFNQSKSEKNDAVYRKTGRSSSFNQQRGSYGRGGGSGGGTAPSSNSFSYSRSFSKKSNNAQGGQSRLNPPGHSTESTSASTAQTINNGTHVQPQLHGASDGPVTKSSESSTAHRSAGILPKAPTSLQPPLISDPVPPTSPAKGDASNKAFPFQFGSIAPSFINGMAIPARTSSAPPNLDEQKRDQALHDSYKSVPSVPIPPVPKQQQPPRKDAGVTEQSNAGESRDTHIGGTKAKKDPQVPASQMPKPSSVPVSGISMSTPYHQSQSPLQFGGANPQIQSQGMSTASLHMPIPMPLPIVNATQVQQPVFVPGLQPHPMHPQGIMHQGQNMSFAPQMGHQLPHQLGSMGIGIGPQYPQQQGGKFAGPRKTTPVKITHPETHEELRLDKRTDAYSDGGSSGARSHPNIPSQSQPVKSFPASHPVNYYSSSSYNTNSLYYPPSSLPLTSSPISPNSQPPIFNYPVNHGPQGASFMNSSSLGTLPINKASTPTGVASLNIKPSGTSAIVDSTASCDASSSVLQKGSETCSEISLQQSKLSSDSVPVVSNNEGGRESLSRSNSLKDKKPGKKGPLSQHQVSVQSPTTDNVPSRAVDHGISNTGVSEPVGTKTNHSAEITTEDLPTSDTIPSSISTAVEVKTNGSAEVSACVSAEGSGAQTIDRVHNHNPDKIDKLAEGNSGTSDLQSADLPETTSKRVKDGSENTGGESGTKERPIIEPNKAKTTSKGKKKRREILQKADAAGSMSDLYNAYKGPEEKKEVVLSSESTEGATTQSLKQLPKDAAQSDALASEKCGQSKAELDDWEDAADMSTPKLEVHDKSQVGDGSGSTAKKYSRDFLLKFAEQCTDLPEDFEVTTDIEALMSANIGSSHVFERDSHASPGRIVDRPGGMSRMDRRGDVVMEDDRWSKVSGAFRSGRGLDGIGGNVGFRSGQGGNFGVLRNPRAQTPPQYAGGILSGPMQSVGNHGGRNNPDGERWQRSASFQQRGLIPSPTQTPLQMMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEQEANKADEGEVKQSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQLQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRSGRGLGNNQSARRNPMDFGPRGSSMLSPNSQMGGLRGLPTQVRGYGASQDARFEERQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSMRGLTAISNLPISDAHHVPGDSHRMTTGLNGHSNLSERTPYSSREDLVSRYGTDRPSGPSAYDQSSAPERNVNHGNRDLRSADRNLEPPAQLQGSTVSQNASSEKIWPEERLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVNLVKSQHGTLSQVHLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKAITESVVTLKEIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIQSEKGDAVLNEIRSSSNLRLETFRPPNAKTSRKLENFI 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01993 1658 Coils Coil 1098 1130 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1417 1431 - -
Pumo7g01993 1658 Pfam MIF4G domain 1016 1238 IPR003890 GO:0003723|GO:0005515
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 761 777 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1108 1132 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 396 418 - -
Pumo7g01993 1658 SMART if4_15 1016 1238 IPR003890 GO:0003723|GO:0005515
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 374 392 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1318 1343 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 531 554 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 870 891 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 555 569 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 244 282 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 168 282 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1 152 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 39 115 - -
Pumo7g01993 1658 Pfam MA3 domain 1476 1583 IPR003891 -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 657 739 - -
Pumo7g01993 1658 SMART ma3_7 1471 1585 IPR003891 -
Pumo7g01993 1658 Gene3D - 1016 1251 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1385 1401 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 755 795 - -
Pumo7g01993 1658 FunFam Eukaryotic translation initiation factor 4G 1464 1657 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1241 1262 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 689 703 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 212 227 - -
Pumo7g01993 1658 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 340 1658 IPR045208 GO:0003743
Pumo7g01993 1658 SUPERFAMILY ARM repeat 1466 1656 IPR016024 -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1241 1302 - -
Pumo7g01993 1658 FunFam Eukaryotic translation initiation factor 4G 1016 1251 - -
Pumo7g01993 1658 Gene3D - 1465 1658 - -
Pumo7g01993 1658 ProSiteProfiles MI domain profile. 1470 1594 IPR003891 -
Pumo7g01993 1658 SUPERFAMILY ARM repeat 1012 1240 IPR016024 -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 1374 1442 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 17 32 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 572 627 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 359 418 - -
Pumo7g01993 1658 MobiDBLite consensus disorder prediction 531 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01993 Pumo-Chr7 53593260 53602669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01993 1 1657 Eukaryotic Initiation Factors Gene Family AT3G60240 47.062 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01993 K03260 - gmx:100798562 2833.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01993 7 53593260 53602669 Pumo7g01993 7 53593260 53602669 ECH