Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01980 ATGGTTGGCACTGGGGTAGGTGCATCTCAGGGTATACTCATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGCGTTGTATTTGACAAGACAGGTACTCTCACTATGGGGAAGCCTGTGGTAGTAAATACAAAATTGTTGACAAATATGGTACTCAGGGAATTCTATGAACTAGTGGCTGCAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCAATTGTTGAGTATGCCAAAAATCTAAGAGATGAAGATAACCCCATTTGGGCAGAGGCACAGGATTTAGTGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAACAAGGAAATACTTGTGGGTAACAAGGCCTTGATGGTGGACCACAATGTTGCACTTCCTTTTGATGCTGAAGAGATACTTGCAGAAGCAGAAGCAATGGCTCAAACTGGAATTATAGTATCTATAAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCACAAGAAGTCGCTTCGATTCTCAAGTCCATGAAGATCAGGAGCATCATGGTGACTGGGGACACTTGGGGTACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAATTTGTTGTTGCTGAGGCCAAGCCAGAGCAGAAGGCAGAGCAAGTGAAGGACTTGCAGGCTTGTGGGTACAGGGTGGCTATGGTGGGGGATGGAATCAACGATTCCCCAACACTTGTGGCAGCAGATGTAGGAATGGCAATAGGTGCTGGTACAGACATAGCTATTGAGGCTGTTGACATTGTGCTGATGAAGAGTAACTTGGAGGATGTGATAACTGCCATTGATCTTTCCAGAAAAACGCTTTCCCGAATCCGCCTCAACTACATGTGGGCTTTGGGCTATAATCTGCTTGGCATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCGGTTGCCGCCATGGCTTGCTGGGGCTGCCATGGCTACCTCCTCTGTCAGTGTTGTTTGTTGTCTCTACTCTTGA 1029 0.4597 MVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTMGKPVVVNTKLLTNMVLREFYELVAAAEVNSEHPLAKAIVEYAKNLRDEDNPIWAEAQDLVSIAGHGVKAMVRNKEILVGNKALMVDHNVALPFDAEEILAEAEAMAQTGIIVSINREVVGVLAVSDPLKPAAQEVASILKSMKIRSIMVTGDTWGTANSIAREVGIEFVVAEAKPEQKAEQVKDLQACGYRVAMVGDGINDSPTLVAADVGMAIGAGTDIAIEAVDIVLMKSNLEDVITAIDLSRKTLSRIRLNYMWALGYNLLGIPIAAGALFPSTRFRLPPWLAGAAMATSSVSVVCCLYS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01980 342 Gene3D - 1 291 IPR023214 -
Pumo7g01980 342 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 339 - -
Pumo7g01980 342 Gene3D - 114 165 IPR023299 GO:0000166
Pumo7g01980 342 Gene3D - 37 113 IPR023299 GO:0000166
Pumo7g01980 342 SFLD Haloacid Dehalogenase 12 286 - -
Pumo7g01980 342 ProSitePatterns E1-E2 ATPases phosphorylation site. 32 38 IPR018303 -
Pumo7g01980 342 FunFam Probable copper-transporting ATPase HMA5 120 291 - -
Pumo7g01980 342 SFLD p-type atpase 12 286 IPR044492 -
Pumo7g01980 342 PRINTS P-type cation-transporting ATPase superfamily signature 257 269 - -
Pumo7g01980 342 PRINTS P-type cation-transporting ATPase superfamily signature 30 44 - -
Pumo7g01980 342 PRINTS P-type cation-transporting ATPase superfamily signature 159 170 - -
Pumo7g01980 342 PRINTS P-type cation-transporting ATPase superfamily signature 181 191 - -
Pumo7g01980 342 PRINTS P-type cation-transporting ATPase superfamily signature 234 253 - -
Pumo7g01980 342 Pfam haloacid dehalogenase-like hydrolase 26 248 - -
Pumo7g01980 342 NCBIfam heavy metal translocating P-type ATPase 1 337 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pumo7g01980 342 PRINTS H+-transporting ATPase (proton pump) signature 234 250 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01980 342 PRINTS H+-transporting ATPase (proton pump) signature 265 290 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01980 342 NCBIfam HAD-IC family P-type ATPase 12 316 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01980 342 SUPERFAMILY HAD-like 29 338 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01980 Pumo-Chr7 53174683 53177011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01980 1 339 Primary Pumps ATPases AT1G63440 82.353 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01980 K17686 - gmx:100810141 606.29