Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01979 ATGCCGCATAAGAATCCAAGGCATGACATGCACGTCGTGTTCCTCCACCGTGGAATCAGCTCTGCGATCAATCCAAGGAGTGGTGAGAGCCCAAGTGGCTCTAGCAACCGAGGAAGCTCAAGTTCACTACACTCCCAACTCCTGAAAGCTATAGATGACACGGGTTTCGAAGCCACGCTTATAAGCACAGGTTTTGAAGACATGATCAGCAGAGTAGTCCTTCAAGTTGAGGGCATAAGAACTAATCGTTCCATGAGACTCATTGAAATTTCTCTTTCTTATAAACCAGACTTGACAGGACCAAGGAATTTCATCAACGTGATTGAACAAACGGGTTTCAAGGCAAAGATTTTCCCGCAAGAAGGAGGAAGATTAAGGAATAGTACTCCTCATATTCATAGGAGGGAGGAAATAAGGCAATACTATAGATCCTTTTTATGGAGTTTGGTGTTTACTATTCCTGTGTTTCTAACCTCTATGGTGCTTATGTATATCCCTGGAAGAATTAAGCATGGACTAGATGCCAAAGTTGTGAACATGCTTACAGTGGGGGAGATTGTAAGATGGGTGCTCGCCACACCGGTGCAGTTCGTTATAGGCAAGAGGTTTTACTCAGGTTGTTACAATGCGTTACGCCGTGGCTCTCCCAACATGGATGTTTTGATTGCATTGGGGACAAATGCAGCATACTTTTACTCACTGTATTCTGTTTTGAGAGCTGCTACATCTCAGGGTTTCAAGGGAACTGATTTCTTTGAGACTAGTGCTATGCTTATTTCGTTTATTTTGCTAGGGAAGTACCTTGAGGTTTTGGCAAAAGGGAAGACATCAAATGCAATTGCCAAGCTCATGAACTTGACCCCAGACACTGCTGTGTTGCTGACTCTAAACAGTGAAGGAAATGTTGTTGGGGAGGAGGAAATTGATAGCAGGTTGATTCAGAAGAGTGATGTGATCAAAGTTGTTCCGGGTGCAAAAGTGGTCTCGGATGGAGTTGTTATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATAACTGGTGAGGCACGCCCTGTGGCAAAGAGGAAAGGTGACACTGTCATTGGAGGAACTATGAATGAGAATGGAGTGCTGCGTGTTAAGGCCACAAAGGTTGGATCAGAGATTGTTCGACTTGTTGAGTCTGCACAGATGGCCAACGCTCCTGTGCAAAAGTTTTCTGACCGCATTTCCAAATACTTTGTTATTTTAATCTCATTTTCAACATGGCTTGCCTGGTTTTTAGCTGGAACATTTCATGCTTACCCTAAGTCTTGGATACCATCTTCCATGGATAGCTTTCAGCTTGCTTTGCAATTTGGATTTCTGTCATGGTCATAG 1359 0.4393 MPHKNPRHDMHVVFLHRGISSAINPRSGESPSGSSNRGSSSSLHSQLLKAIDDTGFEATLISTGFEDMISRVVLQVEGIRTNRSMRLIEISLSYKPDLTGPRNFINVIEQTGFKAKIFPQEGGRLRNSTPHIHRREEIRQYYRSFLWSLVFTIPVFLTSMVLMYIPGRIKHGLDAKVVNMLTVGEIVRWVLATPVQFVIGKRFYSGCYNALRRGSPNMDVLIALGTNAAYFYSLYSVLRAATSQGFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAVLLTLNSEGNVVGEEEIDSRLIQKSDVIKVVPGAKVVSDGVVIWGQSHVNESMITGEARPVAKRKGDTVIGGTMNENGVLRVKATKVGSEIVRLVESAQMANAPVQKFSDRISKYFVILISFSTWLAWFLAGTFHAYPKSWIPSSMDSFQLALQFGFLSWS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01979 452 SUPERFAMILY Calcium ATPase, transduction domain A 305 381 IPR008250 -
Pumo7g01979 452 Gene3D - 273 390 - -
Pumo7g01979 452 PRINTS Copper-transporting ATPase signature 255 274 - -
Pumo7g01979 452 PRINTS Copper-transporting ATPase signature 203 222 - -
Pumo7g01979 452 PRINTS Copper-transporting ATPase signature 403 417 - -
Pumo7g01979 452 PRINTS Copper-transporting ATPase signature 275 293 - -
Pumo7g01979 452 MobiDBLite consensus disorder prediction 23 41 - -
Pumo7g01979 452 FunFam Copper-transporting ATPase 1, putative 273 390 - -
Pumo7g01979 452 NCBIfam HAD-IC family P-type ATPase 258 422 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01979 452 MobiDBLite consensus disorder prediction 22 41 - -
Pumo7g01979 452 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 44 447 - -
Pumo7g01979 452 Pfam E1-E2 ATPase 287 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01979 Pumo-Chr7 53172983 53174641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01979 42 448 Primary Pumps ATPases AT1G63440 70.068 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01979 K17686 - gmx:100810141 672.159