Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01959 ATGGAAGGAGAGAGAGGTGTAAATCCCAATTATGAGCTCCAAGTTTCATTCACAAACACCCCTCAAGCCATCCATGAAATGGGTTTTGTCCAATTTGAAGAAAACCAGGTTCTTAGCTTCTTGGCACCCTCCGCTCAATCCCAATCTTCTCAGCTCTCTCAATCTCTAAACCGCGGCAGCGCCAGTAATACTGCTGTCGCCGCTACCACAACCGCCACCGCCACTGCCACCACCTCCGGATCCAGAGCAACAATTGGTTTCAGCCATAATGACCTTGTATCCAGAACTTCTTGGAATAATGAACAGGTGCAAACACTGGATCCCAAAGCTGTCAATGATGAAAATTGCACCGGAAATACTAGTGATGGCAACAACACATGGTGGAGAAGTGCAGGCTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAGCCACGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTACCGCTGTACCCACAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTAATAACTACCTATGAAGGCAGACACAACCACTCTCCTTGCGATGACTCAAATTCATCGGAACATGAATGTTTCACCTCTTTTTGA 705 0.4539 MEGERGVNPNYELQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLNRGSASNTAVAATTTATATATTSGSRATIGFSHNDLVSRTSWNNEQVQTLDPKAVNDENCTGNTSDGNNTWWRSAGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01959 234 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01959 234 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 221 IPR044810 GO:0003700
Pumo7g01959 234 Gene3D WRKY domain 147 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01959 234 FunFam WRKY transcription factor 57 146 220 - -
Pumo7g01959 234 SUPERFAMILY WRKY DNA-binding domain 152 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01959 234 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01959 234 ProSiteProfiles WRKY domain profile. 155 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01959 Pumo-Chr7 52882890 52893681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01959 3 234 WRKY Transcription Factor Family AT2G44745 55.000 2.01e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g01959 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01959 - - gmx:100800671 412.149