Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01953 ATGGCAGACTCCGAATTCGAACCCAACCTCGATCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCCTCCGAATCGGCCACGCCGTTTATCCGCAACGCCTCGCAGCGCAGTGTCGTTTATTCGCCGCGTCGCCGGACTTCGTCTGCCACGTCAGCACTCTCCCCGGCTCGCCGCTCTCCGTTACGGATAACGGACTCGTCACGCCCTCCGTTAGCGCCGTCTTCGCCCTCGGAAGCTTCTTCTCTCTCCGCTTCTCGCCGCAGCCGCAAACTCACCGTTTCAGGAAACGCAAGTTGCTCTTCGATTCCGCCGAAGATGGAAGAGAGCACAAGAGGTTAGCGATTCGTAATGGACTTCCAGAATTTTCGTTCCAGAGTTTTGCTGATGCTGCAGAGGCTCTGATGAGAAGAAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGCGGGAATTTTGTATTCCCCCTGCGTATTGATAAAAATGAAGAGTGTTCAGGTTGTCCAATGCCAAATTTTGAACAAAGGGAAGCCAATAATGATGCCAGCACAACCATGTCTAATGGAGAGGTTGCTAAATCTATTATCAAAGCAAGTTACTTAAACTGTCCAAAGCTAGTGGGCATAAATAGATTCATGGAATGTAATCTCTTTGTTGACCGTGCTCTCTTGGATCCCTCATTATGCAAAGACGGAATTGTTAATAGCCTTGGATTTGGGAAGAAAATGGATTATTTTGACACATTTACGCATGACTGTGCTGAACAAAACAGTATTCATCATGTGGATGAAGATGGTATTGATAAAAGTAATACTTGCAAAGATCAACCAAGAGACCCTAATGAAGATGATGAGGTGGAAAGTGGTTCAAAGAAAGGGCTGATTGATTCTGGCACAAATAGAGACAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTGGAGAAGAATTGACTAATGGTTTGGAACAAAAGAACCGTGTCCATGCAATAAATTTGGAAAAGGAGAGTGAGAGAAACACAGTGACTAAGTCTACTAATAAAATAGCCAATTCCTCTTCAACTCCAAAGCGGGTTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTACACCCTAAGTCACAAATTCCTAAAGAGCCACTAGCCAGAAATGTTCCTAAAAATGTTGATCAATGTAAAAATGATCAGAAACTTACAACGAGGAAGCAAAATCATAAGGAGAACAAGGCAGAAAATATTGCCACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGAGCTCAAAGAACTTCTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAACGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGGTATGAGGGCTCTTTAAAAAATGGCAACAGCGACTGCTTTGTTTTAGAGCATGTTGACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTTCTCTCAAAAGCTAAGCAAAGGTTACCTAATTGATTTCAATCTTGCCATGGTTAGTCAATTGCGCATCTGTTCAGGTAAATCAAAACCTAGCCTCAATGGGTTATCCAATAATGTTTCTCTCTCTTCTGGTTCTGCCCCTTTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGCCTATAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAGCAAAAGGCTTATACTGGTCCTCCGCTGAAAAATTGTCCTGATAAGGCTGGTGGAAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTATAACTTCTGCAAAAGATGCTAGCACTAGGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCATGGAAGAAAGGAGCTTATCAGCCTTGTGAATACTATGAAATGTGCAAACAACAGTTCGACAATAGGTCCTTCTTCTCAAAGGAAAAGGGTTACTGCTCCCTCAGGCAGGGTAGATGGCAAGATTTTTTATATTACCCCAATGCCTCTGCATTCATCTACTGTTGGTGGAGGATTATTGAGAAGCAAAGGAGATGGAAAACAGAAAAAAGATGGCTCATGTGTTGGAACCAAAGGATTCCGTGCTCCAGAGGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACATGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCTTTTCCTGTGGAGTTACTTGATGATCGATACTTACAGTCATGGGACATAGAAAGCTGGTGCAAGATTCACACAAAGAGACCAGAGTTTCTTGAGCAGATCCCGAAATCGTTGTTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGACTCAGTGCTGAAGATGTTCTAAGACATGAATTCTTTGACTCATTGCATGAGTCCCTGAGGAAGCAAAGGATGATTCATCGAGCTCTCAGGTCAGATGCTGCAGCTTCCAAGAGCAATCTGACATCAGTTTCATTAAGTGCAGGTATTTTTGGTAGCAACAACTGA 2841 0.4263 MADSEFEPNLDLEEKSWHLLALLLRIGHAVYPQRLAAQCRLFAASPDFVCHVSTLPGSPLSVTDNGLVTPSVSAVFALGSFFSLRFSPQPQTHRFRKRKLLFDSAEDGREHKRLAIRNGLPEFSFQSFADAAEALMRRNFPVIKFESQNIGSGNFVFPLRIDKNEECSGCPMPNFEQREANNDASTTMSNGEVAKSIIKASYLNCPKLVGINRFMECNLFVDRALLDPSLCKDGIVNSLGFGKKMDYFDTFTHDCAEQNSIHHVDEDGIDKSNTCKDQPRDPNEDDEVESGSKKGLIDSGTNRDKEDVAQRVNAALCGEELTNGLEQKNRVHAINLEKESERNTVTKSTNKIANSSSTPKRVLKSSSILKGGQKNDLHPKSQIPKEPLARNVPKNVDQCKNDQKLTTRKQNHKENKAENIATTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTSDGKRVAIKCPHSNAHKNHVNNERNMLERFGGKNFIIRYEGSLKNGNSDCFVLEHVDHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDVKPGNFLFSQKLSKGYLIDFNLAMVSQLRICSGKSKPSLNGLSNNVSLSSGSAPLVRDKNLGGSKPITSNKRALADYKNYSELNRHVKQKAYTGPPLKNCPDKAGGSFLRAQGTDGSGITSAKDASTRTASAERLREPLPSHGRKELISLVNTMKCANNSSTIGPSSQRKRVTAPSGRVDGKIFYITPMPLHSSTVGGGLLRSKGDGKQKKDGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLDDRYLQSWDIESWCKIHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSLHESLRKQRMIHRALRSDAAASKSNLTSVSLSAGIFGSNN 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01953 946 Pfam Protein kinase domain 438 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01953 946 Pfam Protein kinase domain 764 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01953 946 SMART serkin_6 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01953 946 MobiDBLite consensus disorder prediction 266 307 - -
Pumo7g01953 946 FunFam Probable serine/threonine-protein kinase DDB_G0291918 428 590 - -
Pumo7g01953 946 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 377 926 - -
Pumo7g01953 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Pumo7g01953 946 MobiDBLite consensus disorder prediction 665 680 - -
Pumo7g01953 946 ProSiteProfiles Protein kinase domain profile. 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01953 946 MobiDBLite consensus disorder prediction 346 372 - -
Pumo7g01953 946 MobiDBLite consensus disorder prediction 663 686 - -
Pumo7g01953 946 SUPERFAMILY Protein kinase-like (PK-like) 430 909 IPR011009 -
Pumo7g01953 946 FunFam Kinase like protein 745 915 - -
Pumo7g01953 946 Gene3D Transferase(Phosphotransferase) domain 1 744 935 - -
Pumo7g01953 946 Gene3D Transferase(Phosphotransferase) domain 1 397 590 - -
Pumo7g01953 946 MobiDBLite consensus disorder prediction 335 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01953 Pumo-Chr7 52755012 52762483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01953 768 910 Core Cell Cycle Gene Families AT2G38620 31.579 9.24e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Pumo7g01953 Pkinase 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01953 K02214 - gmx:100783107 1637.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01953 7 52755012 52762483 Pumo7g01953 7 52755012 52762483 ECH