Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01929 ATGAGCATTGCTAATAGTTGTGCTAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGATAGTACCAAAGGGAGTGTAAGGGGGGATTCACTAGAGAGTGCTAAAACTAGTATTAGTCGGCCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGGTTACGGGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTAGGATGCGGTGATATTGGAAGTGTGTATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACAAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCGTTTCTACCAACTTTGTATACACATTTTGAGACTGACCGATTCTCGTGTTTGGTAATGGAATATTGTCCGGGTGGTGATCTGCACACTTTAAGGCAGCGGCAACCTGGAAAACATTTCTCAGAATATGCTGCACGCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTCAAACCTGAAAATGTATTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGTGCTGTTTCACCTACTCTTATTAGAACTTCCTATGATGGTGACCCTTCAAAACGGGGCAGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTGTGCATCCAACCTGCATGTTTTATTCCTCGGTTATTTCCTCAGAAAAACAAGAAGTCACGGAAGCCAAGAGCTGATCCTGGGTTGCCGTCCAGCACACTTCCTGAGCTAGTTGCCGAGCCTACTCAAGCTCGATCTATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCCAGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTCGGAATTTTCTTGCACGAGCTATTATATGGTAAAACCCCTTTCAAAGGGTCAGGAAACCGCGCTACACTTTTCAATGTAGTTGGTCAGCAGCTCAGGTTTCCCGAATCACCTGCGACCAGTTATGCCAGCAGGGATCTGATCCGTGGCTTGCTAGTGAAGGAGCCACAGCATCGTCTTGGCGTTAAAAGGGGCGCAACTGAGATCAAGCAGCACCCCTTCTTCGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACGCCGCCGGAAGTGCCGAGACCAGTGGAAAATGAACTACCTGGACCTGGACCTGGACCTGGAGGGAAGGTTGGACCAGTTGATACTGTTGGGGTTGGCAGCACTAGTAAGAGGATAGTAGGTACTGACAACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 1497 0.4689 MSIANSCASTYRSDAMTSDGMLSLDRNCDSTKGSVRGDSLESAKTSISRPSDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRGSAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRADPGLPSSTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENELPGPGPGPGGKVGPVDTVGVGSTSKRIVGTDNMKSGGKYLDFEFF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01929 498 MobiDBLite consensus disorder prediction 30 75 - -
Pumo7g01929 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pumo7g01929 498 Gene3D Transferase(Phosphotransferase) domain 1 325 447 - -
Pumo7g01929 498 Gene3D Transferase(Phosphotransferase) domain 1 182 250 - -
Pumo7g01929 498 MobiDBLite consensus disorder prediction 446 468 - -
Pumo7g01929 498 SUPERFAMILY Protein kinase-like (PK-like) 79 451 IPR011009 -
Pumo7g01929 498 FunFam serine/threonine-protein kinase D6PK-like 182 249 - -
Pumo7g01929 498 Pfam Protein kinase domain 99 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01929 498 Pfam Protein kinase domain 327 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01929 498 Gene3D Phosphorylase Kinase; domain 1 96 181 - -
Pumo7g01929 498 ProSiteProfiles Protein kinase domain profile. 98 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01929 498 CDD STKc_phototropin_like 96 449 - -
Pumo7g01929 498 FunFam serine/threonine-protein kinase D6PK-like 325 448 - -
Pumo7g01929 498 MobiDBLite consensus disorder prediction 448 462 - -
Pumo7g01929 498 PANTHER FLIPPASE KINASE 1-RELATED 36 452 - -
Pumo7g01929 498 MobiDBLite consensus disorder prediction 30 71 - -
Pumo7g01929 498 SMART serkin_6 98 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01929 498 FunFam Serine/threonine-protein kinase D6PK-like 96 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01929 Pumo-Chr7 51270557 51272607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01929 1 498 AGC Kinase Gene Family AT2G44830 77.647 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo7g01929 Pkinase 5.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01929 - - gmx:100803708 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01929 7 51270557 51272607 Pumo7g01929 7 51270557 51272607 ECH
Pumo7g01929 7 51270557 51272607 Pumo5g00069 5 2811124 2816471 PCT