Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01916 ATGGCCACCACAACATCTTCATTAGAGTCTATTCAACACTATTTTCTTGAGCTTGAACACGATTATTCCAACACTCTCACGAGTGTTTCCAACCACGAAATCTGTTATTCTCCATCGTATGATCCATTTTCAAGCCCTAAGATCAGCTCGGAGAGTGTTAGTGACGTGAGTAAATCGTTGGCATGCAAAAGGGAACACCATAAGGTGGCGCGTGAAGTTCACGCCCCACTGGTGTGGAAGCGCTACCGGGGCGTGAGGCGTAGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGAGATCCAAAGAAGAAGCAGGTTTAG 318 0.4874 MATTTSSLESIQHYFLELEHDYSNTLTSVSNHEICYSPSYDPFSSPKISSESVSDVSKSLACKREHHKVAREVHAPLVWKRYRGVRRRPWGKFAAEIRDPKKKQV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01916 105 PANTHER DNA-BINDING DOMAIN 58 102 IPR044808 GO:0003700|GO:0009873
Pumo7g01916 105 Gene3D AP2/ERF domain 80 105 IPR036955 GO:0003700|GO:0006355
Pumo7g01916 105 ProSiteProfiles AP2/ERF domain profile. 81 105 IPR001471 GO:0003700|GO:0006355
Pumo7g01916 105 SUPERFAMILY DNA-binding domain 81 102 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01916 Pumo-Chr7 50603599 50603916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01916 49 104 AP2-EREBP Transcription Factor Family AT4G27950 50.000 2.81e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01916 K09286 - gmx:100527194 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01916 7 50603599 50603916 Pumo7g01916 7 50603599 50603916 ECH