Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01914 ATGAATTTCAACACCACTCTTGAATCCGATGATTTTGCTCTTCTAGAATCCATTCAACGTTACCTCCTCGACGACAACGAAGACTTCAACGCTCTAACGGCGGTTTTGGCCACGCCTAACGGCGTTTCGCCGAGGACGAGTGGCAGTGAATCAACGTCTGCCCATTATGTTGACGCCGTTAACTCTCCGTTATCTTCGTTGGAGCATGCAACAATGGCTGCCACGGAGGCGCGTGGGGCTTCGACTGCGGCGGCGCGTGGTGGCCACGCGCGTTGCCAAAATTACAAGGGAGTGAGGCGTAGGCCTTGGGGGAAGTTTGCGGCTGAGATAAGGGACCCGAAGAGGAACGGCGCGAGGGTGTGGCTTGGGACTTACGAGTCGGCTGAGGATGCGGCTTTGGCTTATGATCGAGCCGCTTTTGAAATGCGCGGCTCCAAAGCTAAGCTGAATTTTCCTCATTTAATTGGGTGCAATGATGCTGAGCCGAGCCGAAGACAGTAA 501 0.5429 MNFNTTLESDDFALLESIQRYLLDDNEDFNALTAVLATPNGVSPRTSGSESTSAHYVDAVNSPLSSLEHATMAATEARGASTAAARGGHARCQNYKGVRRRPWGKFAAEIRDPKRNGARVWLGTYESAEDAALAYDRAAFEMRGSKAKLNFPHLIGCNDAEPSRRQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01914 166 PRINTS Ethylene responsive element binding protein signature 134 154 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 ProSiteProfiles AP2/ERF domain profile. 94 152 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 PANTHER DNA-BINDING DOMAIN 65 158 IPR044808 GO:0003700|GO:0009873
Pumo7g01914 166 CDD AP2 93 154 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 Gene3D AP2/ERF domain 93 153 IPR036955 GO:0003700|GO:0006355
Pumo7g01914 166 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 SUPERFAMILY DNA-binding domain 94 153 IPR016177 GO:0003677
Pumo7g01914 166 SMART rav1_2 94 158 IPR001471 GO:0003700|GO:0006355
Pumo7g01914 166 FunFam Ethylene-responsive transcription factor 2 93 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01914 Pumo-Chr7 50593702 50594387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01914 58 164 AP2-EREBP Transcription Factor Family AT2G44840 64.865 1.26e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo7g01914 AP2 3.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01914 K09286 - gmx:100806359 241.506