Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01904 ATGTGTGAGGACAGAGTGCAGGATAGTTGCATGTTACAGCATTCTGAGAGAGCATTGAGGAGGACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTGTTTTTCCAACTTTGTCTTCTTATGGCAAGACAAAGAGTAAGAATCCGTATGACGAAAAACGGTTGCTTCAACAAAATCGACGGATACAGAAAGAAAACAATGCGCCGGACGACTTCCCAAATTTTGTTAGAGAAGGTTTTCAAGTTAAAGTAGTATCATCAGATAACTATGTAAAGAGTGATTCTGGGCTCATATATCGAGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTTACTTTTCACTATATTGGCTATAATGAATCTGGCCGTCGAATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAAAATCCGCATGGGTACCAAGGGATTAGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGTTCAAAACAGTTTGAAGTTTTTGATGTCGAGCTATTAAGCGTACAAAACTGTGAAAGAAGAACCATAGCCTTTTACTCGGATGTCATATGCAATTGA 648 0.4136 MCEDRVQDSCMLQHSERALRRTLFLSVLVSTGVFPTLSSYGKTKSKNPYDEKRLLQQNRRIQKENNAPDDFPNFVREGFQVKVVSSDNYVKSDSGLIYRDFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQGSPAKIRMGTKGLVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTIAFYSDVICN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01904 215 Gene3D - 51 207 IPR046357 GO:0003755
Pumo7g01904 215 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 109 195 IPR001179 GO:0003755
Pumo7g01904 215 SUPERFAMILY FKBP-like 46 199 - -
Pumo7g01904 215 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 112 199 IPR001179 GO:0003755
Pumo7g01904 215 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 5 215 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01904 Pumo-Chr7 50454076 50457470 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01904 105 201 Calmodulin-binding Proteins AT5G48570 32.323 5.64e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01904 - - gmx:100305486 422.165