Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01900 ATGTCCCTCCACCGCCATGTTTGCAGCACCTCAAAGCTCTCAACAGCGATCCCTTGGAAGTACAAGAAGTACGCCATAACACAGGGCCAGAAGTCCCTCACCGATTACCTCCACGCCACGCGCTGCATCCCTTACGCCTACGCTGACCAAATCGCCAAAAACTCCCTCACAGCCCTCACCACCCTCATCACCAATCTCGGCTCTTTCTCCCCTCTCCACTTCCCCCACAACCTCAACAAGTTCTTAAGGTACAACCCCATCAACGAATTTGAGTTCTTCTTTGAAAGCATTGGCATTCAGCCCTCCAAGTTCCCTTCTTTCTTGCCCCAGAACAAGTTCTTCTTTTCAGAAGATGGGACCCTTTTGGATGCTGCCTGTGTTCTCAATGAATTTGGGTTTCCCTGGGACAGGCTTGGGGTGCTGTATGTGGAGAGTGGCTGTGTCTTCAAGTGGGGTGCTTCTGAGTTGAAGGGTAGGCTTTGTGGGTTCAAAAGGTATGGTTTTTGCAATGTGCAGGTTGTGGGGATATGTTTGGCTTTCCCCTTTGTGTTTGATGGCCAAAAGGGTGATGAGGTTGATGCTTTGTTTTGTGATTTGAGGTTGCTGTTTGAGGATTTTGGTTTGGCTGAGTGTGTTGAGGGGAAGGGGAATAGTGTGAATGATTGGATTGGGGTGGGTAGGAAGATAAGGTTGTTTTATGATTTGGTTGGTGGGGAGAACATAGTGGAGCTTATTGGAGGGAACAATGGTGTTGGTGTAGGTGTCATTGTGGAGCATGGGGAAGAGAAGTTGGTTCAAGCAGCTGAGTATTTTTGTAGGTTTGGTATGAAGAAGGAGGACGTAGCGCGGTTGATCATAGATGGACCAGAGATGTTGGAGCTTGATTTGGAGACACAGGTGGTTGATGTGGTGAAGCTGTTGAAATACTTTGGAATGAGCTCTGATGATGTTGGGGATGTTAGGAGGGATTATGCTCATGTGTTAGGGACAGTTAAGATGGGTAATCTGCCCAATGTGACGAGGGCTTTGGGTTTACACAAGTGGTTCTTTGATAAGATCAAGGATGGGAATCGTTGGTTGTTAGTTAGTTTTGTCGCGAGCTATCCTGATGAAGTCCGGGATAAAGGCTATCTAGGTCATTTGAAGGCGATTCGGGCGTCAAGAACCCCAACTCACAATATGAGCAAGTTGAACTTCTTGCATGCCATTGGCTTTGGAGAAAATGCTTTGACCATGAATGTGTACAATCAGATGCACGGAACAAGTGTCAAGTTACAAAAGAGATTTGATTGCCTTCTACATCTTGGGATTGAGTTTTCGAAGGTCTGTAAGATGATCACGGTTCATCCTAAGATTCTTAGCCAAAACCCTGACAGTTTAGAGCAAAAGGTTAATTTCTTTTGTCAGGAAATGGGACACTCACTGGAGCATTTGGTCACTTTTCCAGCTTTCTTGTGCTTTGACTTAGAGAACCGCATTAAGCCTAGGTACAGGTTCCATATGTGGGTTATGGAACAGGGTCTGTCTTCCAAAAATTATTCCATTGCAAGTATGGTTGCAACAAGCAACAGGAATTTTGTTGCTCGCGCTTTTAAAATTCACCCAGCTGCTCCGAAACATTGGTTTGAGCAATTCTATCCAAGAAATTTGCCAGTGTGA 1659 0.4575 MSLHRHVCSTSKLSTAIPWKYKKYAITQGQKSLTDYLHATRCIPYAYADQIAKNSLTALTTLITNLGSFSPLHFPHNLNKFLRYNPINEFEFFFESIGIQPSKFPSFLPQNKFFFSEDGTLLDAACVLNEFGFPWDRLGVLYVESGCVFKWGASELKGRLCGFKRYGFCNVQVVGICLAFPFVFDGQKGDEVDALFCDLRLLFEDFGLAECVEGKGNSVNDWIGVGRKIRLFYDLVGGENIVELIGGNNGVGVGVIVEHGEEKLVQAAEYFCRFGMKKEDVARLIIDGPEMLELDLETQVVDVVKLLKYFGMSSDDVGDVRRDYAHVLGTVKMGNLPNVTRALGLHKWFFDKIKDGNRWLLVSFVASYPDEVRDKGYLGHLKAIRASRTPTHNMSKLNFLHAIGFGENALTMNVYNQMHGTSVKLQKRFDCLLHLGIEFSKVCKMITVHPKILSQNPDSLEQKVNFFCQEMGHSLEHLVTFPAFLCFDLENRIKPRYRFHMWVMEQGLSSKNYSIASMVATSNRNFVARAFKIHPAAPKHWFEQFYPRNLPV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01900 552 FunFam Transcription termination factor MTEF18, mitochondrial 381 541 - -
Pumo7g01900 552 Pfam mTERF 396 526 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 Pfam mTERF 259 329 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 SMART mt_12 443 474 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 SMART mt_12 475 509 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 PANTHER CGI-12 PROTEIN-RELATED 113 533 IPR003690 GO:0003690|GO:0006355
Pumo7g01900 552 Gene3D Transcription termination factor 3, mitochondrial 258 545 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01900 Pumo-Chr7 50394627 50400312 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo7g01900 mTERF 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01900 - - gsj:114418754 941.799