Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01889 ATGAACTTAAAGAATAGGCTATCCAAAGACGAGAAAGATTTTGCGCAAACGTGTGCAAATGACCTAAGCCAACATTTGGAGGAGAGTGTTCGGTCAAAGTTGCCTGTTCTGAAGCAATCTTCATCAACTGAAGAGGATGATGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTACCTCGAAAATGGACATTTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTTCACTTCATTTGTTACAAATCAATAAAGGCACTTGTAGAGAGGGGCAAAATTGATCTCCTCTGA 321 0.4143 MNLKNRLSKDEKDFAQTCANDLSQHLEESVRSKLPVLKQSSSTEEDDDMVPEPQLDTFVLCRSKEYLENGHFDDRSKLFEMEPGVLHFICYKSIKALVERGKIDLL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01889 106 PIRSF GINS_Sld5 1 106 IPR008591 GO:0006261
Pumo7g01889 106 SUPERFAMILY PriA/YqbF domain 55 106 - -
Pumo7g01889 106 CDD GINS_B_Sld5 53 106 IPR031633 -
Pumo7g01889 106 Gene3D - 1 96 - -
Pumo7g01889 106 PANTHER SLD5 PROTEIN 3 106 IPR008591 GO:0006261
Pumo7g01889 106 Pfam DNA replication complex GINS protein SLD5 C-terminus 53 106 IPR031633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01889 Pumo-Chr7 50034672 50034992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01889 6 47 Core DNA Replication Machinery Family AT5G49010 55.319 1.60e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01889 K10735 - gmx:100784291 161.384