Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01873 ATGAGTCTCGGCACAAGAGTTGCTTTATTACAGGGAATGAGCCCGAGGGTGTTTGTAGTGTACCGCCATGCTTTTGCAACCATTGTCATTGCTCCAATAGCTTATTTCTCAGGGAGAAATTCAGGCTCCTACTCCTTAAATTTAAGGAGTTTTTCCTTTATATTCCTGGCCTCATTACTTGGCGTTACTTTGAACCATAATTTATTTTTTGAGGGTCTATATCTGGCTTCTTCTTCAATCGCAAGTGCAATGACCAATCTTGTTCCAGCCTTAACATTTGTAATAGCAGCTTGTGCAGGAATGGAGACAGTGAATATTCGAAGCTCGAGATCTTGGGCCAAGATAGTAGGGACAGTGATATGTGTGAGTGGAGCAGTGTCCATTGCTTTGTTGAAGGGTCCAAAGCTACTAAATGCTGAAAACCTGCCATCAAAATCCATAATGGGATCAGCAGGTGATAATTGGTTGCTGGGTTGTCTATCTCTCATTGGATGCTGTTGTGCCTGGTCAATCTGGCTCATTCTGCAGGTTCCAGCCTCTGCAAGCCACCCTGATCACTTATCCTTTTCAGCCTGGATGTGTTTCATGGGAACATTACAATCAGCATTAGTGACACTACTGTTGGAGCCAGACCCACATGCATGGAAGATTCATTCTCTACTTGAATTTGGTTCCACTTTATATGCAGGAGTTATGGGATCCGCGGTATTATTCTTTATCCAAGCATGGTGCATTTCACTGAGAGGTCCTCTCTTCTCTGCAATGTTCAATCCTCTTTTCACAGTGATTGTGACTGTATTGGCTGCTATATTTCTTCACGAGGAAATATATGTTGGAAGCTTGATGGGCTCAACTGGAGTGATCATTGGCTTGTATGTTTTGCTTTGGGGTAAAGCTGAAACAGTTGTTGCGGTGAATGTGAAGAGCGATCCAAAATCGATGGTTAATAATCCCACAGAGGAAGAAGTGAAAATATTGATAAACGAATCATCTTCTGTAAAGGCATATTGTAAAACCGATTTGGAAGAACCCCTTTTATCTGCTGATTCTCCTTCACATCATTAA 1065 0.4207 MSLGTRVALLQGMSPRVFVVYRHAFATIVIAPIAYFSGRNSGSYSLNLRSFSFIFLASLLGVTLNHNLFFEGLYLASSSIASAMTNLVPALTFVIAACAGMETVNIRSSRSWAKIVGTVICVSGAVSIALLKGPKLLNAENLPSKSIMGSAGDNWLLGCLSLIGCCCAWSIWLILQVPASASHPDHLSFSAWMCFMGTLQSALVTLLLEPDPHAWKIHSLLEFGSTLYAGVMGSAVLFFIQAWCISLRGPLFSAMFNPLFTVIVTVLAAIFLHEEIYVGSLMGSTGVIIGLYVLLWGKAETVVAVNVKSDPKSMVNNPTEEEVKILINESSSVKAYCKTDLEEPLLSADSPSHH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01873 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 131 - -
Pumo7g01873 354 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020
Pumo7g01873 354 Pfam EamA-like transporter family 9 128 IPR000620 GO:0016020
Pumo7g01873 354 PANTHER WAT1-RELATED PROTEIN 4 301 IPR030184 GO:0016020|GO:0022857
Pumo7g01873 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 205 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01873 Pumo-Chr7 49710878 49713529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01873 1 354 Nodulin-like Gene Family AT4G30420 53.611 5.45e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01873 - - gmx:100812331 578.941