Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01872 ATGGGGCGGTTAGAGTCCAAGTTGCCAGTGATGGCTATGTTGATGAATCAGTTCATCTATGCAGGTATTAGTCTTGGCACAAGACTTGCTTTCTTGCAAGGAATGAGCCCTTTAGTGTATGTAGTGTATCGTCATGCTTTTGCAACTATTGTGATTGCTCCCATAGCTTATTTCAAAGGGAGAAATTCTGGCTCCTATTACTTAAATTTAAAGAGTTTTTCCTGGATATTCTTGATCTCACTACTTGGCATTACGGTGAACCATAATTTATTTTTTGAGGGCGTATTTTTTACGGTGAACCATAACTCAAGTGATCAGGGTCCGGCCTCTAAAAGCCACCCTGATCACTTGTCCTTCTCAGCTTGGATGTGTTTCATGGCAACATTACAATCCGTTGTGGTCACACTACTTGAGTTTGGTTGCTCTTTGTATTCAGGAGTTATGGGATCTGCATTATTATTCTTTATCCAAGCATGGTGCATTTCACGTAGCTGTTCTCTGCAATGTTCAATCCACTTTTCACAGTAA 528 0.4053 MGRLESKLPVMAMLMNQFIYAGISLGTRLAFLQGMSPLVYVVYRHAFATIVIAPIAYFKGRNSGSYYLNLKSFSWIFLISLLGITVNHNLFFEGVFFTVNHNSSDQGPASKSHPDHLSFSAWMCFMATLQSVVVTLLEFGCSLYSGVMGSALLFFIQAWCISRSCSLQCSIHFSQ 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01872 175 Pfam EamA-like transporter family 9 95 IPR000620 GO:0016020
Pumo7g01872 175 PANTHER WAT1-RELATED PROTEIN 8 98 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01872 Pumo-Chr7 49708985 49710254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01872 106 163 Nodulin-like Gene Family AT4G30420 41.667 1.21e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01872 - - gmx:100812331 162.155