Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01858 ATGCGAATGGCCTCTTCCACATTCTTTCTACTACCTCTTCTCCTCTCTCTAATTTTCCATAATTTTCAGCACTCATCTTCCTTCTCTCTCTCCGTCGAGAAACTCAAAGAAGACGTAATAGTGTCATCACCCAAAGCCACTTTCACAGCAGGGTTTTACCCGGTTGGTGAAAACGCATACTGCTTCGCAATATGGTACACTCAACCACCTCGCACCGTCGTTTGGATGGCCAACCGGGACCAACCGGTAAACGGAAAACGTTCTACGCTTTCCCTTCTCAAAACCGGTGACCTCGTACTAACCGACGCGGGCCAGTTCAAGGTGTGGTCCACAAACACCCTCACATCATCGAAACAAGTCCAGTTACATTTGAACGACACCGGCAACCTCGTTCTCGTTGACACCTCCAACGATGTTGTTCTGTGGCAAAGCTTCGATTTTCCAACCGACACGCTCCTTCCTAATCAACCTCTGAGAAAGAGCACGAACCTTGTTTCCTCGAGAAGCGGGACCAACTATTCGTCCGGTTACTACAGGCTCTTCTTCGACTTCGAGAATGTTCTCCGTCTTATGTACCAAGGCCCTCGGGTTACGAGCCTTTACTGGCCAGATCCTTGGCTTCAGACCAATGATTTCGGTAATAATGGGAATGGTAGATCCACTTTCAACGATACCAGAGTTGTTGTGCTCGATGATTTCGGCAACGTGGTTTCTTCCGATAACTACACTTTCAGTACAAGCGATTACGGGACGGTACTCCAACGGAGATTGACCCTCGAGTACGACGGCAATGTGAGGGTGTATAGCATCAAAGATGGAGAACACAAGTGGTCGGTGTCAGGGCAATTTCGGCGACAACCTTGTTCTATTCACGGGATTTGTGGACCCAATAGTTATTGCCGGAATGAGCCAAGTGGAAGAAAGTGTGTATGCCTTCCAGGTCACAGATGGGTTGATAGTGAAAACTGGTCTCAAGGTTGCGTACCGAATTTCCAACCTTGGTGCAACAGCACTAAGCAAGAGTCTCACTTCCGGCGCTTACCCCGACTCGATTTTTTCGGATACGACTATCGCCACTATCTGAATCACACGTACCAAGAATGTGTGAATCAGTGCTTGCAGTTGTGCGAATGCAAAGGGTTTCAATACAGCTTTACGGAGCAAAGTGATTCTACTAGTCAGTGCTACCTGAAGACGCAGTTGCTAAATGGCCATCGTTCACCGAGCTTCCCGGGAGAATTCAACCTGCGAGTGCCTTTGTCCCTCCAAGACTATGAAGAGGGGGCCATTCTGAATAATGGCAGTGGCTTGGTCTGTGGGGGAAATAGTAGTGGAGGAGAGACAGTTCTAGAGAGATCATATGTGAAAGAAAAAGAAAATGAGTTCGTGAAGTTCATGTTGTGGTTTGCGATTGCCTTAGGAGGAATTGAGCTCGTGTGCTTCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAATGCTGATAAACAAGGCTATGTTCTTGCCGTGGAGACGGGCTTTAGGAAATTCAGGTACTGTGAACTGAAAAAGGCCACCAAAGGTTTCAGTCAAGAGATAGGAAGGGGTGGGGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATGATCGAGTTGTGGCAATAAAGAGACTACATGAAGTAGCAAACCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGGCATGTTGGGGTATTGTGCGGAAGGAAAGTATAGGCTGTTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCTCAGAACCTTTCATCAAGTTCAAATGTACTTGACTGGAATAAGAGGTATAACATTGCTCTGGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGATTACCAACCCAAAGTAGCAGATTTTGGCTTGTCTAAGTTACTTAACCGGAACAACCTGAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCAGAATGGGTTTTCAACTTGGCGATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTAGAGATGATAACTGGAAGGAGCCCAACCACAGGTATACAAATCACAGCAGAATTAGAAGCAGAGTCACATCATCACGAGAGATTGGTGACATGGGTTAGGGAGAAAAGGAGGACAAAATCAGAAGTGGGATCATCTTGGGTGGATGAAATCGTTGACCCAGCTTTGGGATCAAACTATGACATGAATGAAATTGAGATATTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAACGCGAGACCCAGCATGAGTCAAGTTGCTGAGAAGCTGTGTAGTCATGAACACGATTAA 2430 0.4584 MRMASSTFFLLPLLLSLIFHNFQHSSSFSLSVEKLKEDVIVSSPKATFTAGFYPVGENAYCFAIWYTQPPRTVVWMANRDQPVNGKRSTLSLLKTGDLVLTDAGQFKVWSTNTLTSSKQVQLHLNDTGNLVLVDTSNDVVLWQSFDFPTDTLLPNQPLRKSTNLVSSRSGTNYSSGYYRLFFDFENVLRLMYQGPRVTSLYWPDPWLQTNDFGNNGNGRSTFNDTRVVVLDDFGNVVSSDNYTFSTSDYGTVLQRRLTLEYDGNVRVYSIKDGEHKWSVSGQFRRQPCSIHGICGPNSYCRNEPSGRKCVCLPGHRWVDSENWSQGCVPNFQPWCNSTKQESHFRRLPRLDFFGYDYRHYLNHTYQECVNQCLQLCECKGFQYSFTEQSDSTSQCYLKTQLLNGHRSPSFPGEFNLRVPLSLQDYEEGAILNNGSGLVCGGNSSGGETVLERSYVKEKENEFVKFMLWFAIALGGIELVCFFLVWCFLFRNNADKQGYVLAVETGFRKFRYCELKKATKGFSQEIGRGGGGTVYKGVLSDDRVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKYRLLVYEYMENGSLAQNLSSSSNVLDWNKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLAITSKVDVYSYGIVVLEMITGRSPTTGIQITAELEAESHHHERLVTWVREKRRTKSEVGSSWVDEIVDPALGSNYDMNEIEILATVALECVEEEKNARPSMSQVAEKLCSHEHD 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01858 809 CDD PAN_AP_plant 335 419 - -
Pumo7g01858 809 PIRSF SRK 1 808 IPR024171 GO:0004674
Pumo7g01858 809 SMART blect_4 32 148 IPR001480 -
Pumo7g01858 809 SUPERFAMILY Protein kinase-like (PK-like) 499 803 IPR011009 -
Pumo7g01858 809 Gene3D Hepatocyte Growth Factor 344 410 - -
Pumo7g01858 809 ProSiteProfiles Protein kinase domain profile. 519 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01858 809 CDD B_lectin 42 148 IPR001480 -
Pumo7g01858 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Pumo7g01858 809 Pfam S-locus glycoprotein domain 237 315 IPR000858 GO:0048544
Pumo7g01858 809 ProSiteProfiles Bulb-type lectin domain profile. 26 145 IPR001480 -
Pumo7g01858 809 SMART serkin_6 519 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01858 809 Pfam D-mannose binding lectin 72 162 IPR001480 -
Pumo7g01858 809 Pfam Protein kinase domain 522 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01858 809 FunFam Putative receptor protein kinase ZmPK1 20 147 - -
Pumo7g01858 809 ProSiteProfiles PAN/Apple domain profile. 335 421 IPR003609 -
Pumo7g01858 809 FunFam Serine/threonine-protein kinase 595 809 - -
Pumo7g01858 809 SMART ntp_6 339 418 IPR003609 -
Pumo7g01858 809 Gene3D Phosphorylase Kinase; domain 1 487 594 - -
Pumo7g01858 809 CDD STKc_IRAK 525 804 - -
Pumo7g01858 809 FunFam S-receptor-like serine/threonine-protein kinase 489 594 - -
Pumo7g01858 809 Gene3D Transferase(Phosphotransferase) domain 1 595 809 - -
Pumo7g01858 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 203 IPR036426 -
Pumo7g01858 809 CDD EGF 287 314 - -
Pumo7g01858 809 PANTHER OS07G0415500 PROTEIN 6 804 - -
Pumo7g01858 809 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Pumo7g01858 809 Gene3D - 30 146 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01858 Pumo-Chr7 49326498 49329700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01858 509 807 Trihelix Transcription Factor Family AT5G38560 43.709 2.83e-71 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g01858 Pkinase 9.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01858 - - gmx:100807333 1337.78