Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01854 ATGTACCATGGCCCTCGAGTTTCAAGCCTTTATTGGCCAGATCCTTGGCTTCAGAGCAATGATTTCGGTAGTACTAGTGGTAGATTCACCTACAACGATGCCAGGGTTGTTGTACTCGATCATTTTGGCAACTTGGTTTCTCCTGATAACTTCACTTTCAGTACATATGATTCTGGGATAGTGCTCCAACGAAGCTTGACCCTTGATCATGATGGCAATGTTCGTCTATATAGCAATAAAGATAGAGAAGATAAGTGGTCAATCACAGGGCAATTCAAGAATAATACGACGTTACACAAACAAGGTTATGTTCTTGCAGCAGTTGCGGGGTTTCGAAAATTCAGTTACTCTGAACTGAAACAAGCAATCAAAGGCTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGTATTGTGTATAAAGGTGTTTTGTCCGATAATCAAGTTGTGGCGATAAAACGATTGCATGAAGTAGCGAACCAAGGAGAGAATGAGTTCTTGGCTGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGCACATGGAGAATGGTTCTTTAGCTCAGAACCTTGCATCAAGTACGAATGTGCTTGACTGGAGTAAGAGGTACAATATTGCTCTTGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTCAGCCCCAAAATATACTTCTTGACTCTCATTATAAACCAAAGGTGGCAGATTTTGGCTTGTCTAAGCTACTAAACCGGAGCAGCAACCTCAATAATTCAAGCTTCTCGAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAGTGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGGAGGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAAAGTCACCTCATCAAGAGAGGTTGGTGACATGGGTGAGGGACAAAAGGAAGAAAGGATCAGAAATGGGATCATCTTGGGTGAATCAAATTGTTGATCCTGCTTTGGGATCAAACTATGACATCAATGAATTGGAGATATTGGCAACTGTGGCTTTGGAATGTGTAGAGGAAGAAAAAGACGCGAGACCCAGCATGAGTCAAGTTTCTGAGAGGCTCCAAAGACATGAACACCATTCTTGA 1248 0.4303 MYHGPRVSSLYWPDPWLQSNDFGSTSGRFTYNDARVVVLDHFGNLVSPDNFTFSTYDSGIVLQRSLTLDHDGNVRLYSNKDREDKWSITGQFKNNTTLHKQGYVLAAVAGFRKFSYSELKQAIKGFSEEIGRGAGGIVYKGVLSDNQVVAIKRLHEVANQGENEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEHMENGSLAQNLASSTNVLDWSKRYNIALGTARGLAYLHEECLEWILHCDIQPQNILLDSHYKPKVADFGLSKLLNRSSNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITELEAKSPHQERLVTWVRDKRKKGSEMGSSWVNQIVDPALGSNYDINELEILATVALECVEEEKDARPSMSQVSERLQRHEHHS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01854 415 Gene3D Phosphorylase Kinase; domain 1 87 199 - -
Pumo7g01854 415 Gene3D Transferase(Phosphotransferase) domain 1 200 415 - -
Pumo7g01854 415 ProSitePatterns Protein kinases ATP-binding region signature. 130 152 IPR017441 GO:0005524
Pumo7g01854 415 SUPERFAMILY Protein kinase-like (PK-like) 104 409 IPR011009 -
Pumo7g01854 415 PANTHER OS07G0415500 PROTEIN 103 409 - -
Pumo7g01854 415 FunFam S-receptor-like serine/threonine-protein kinase 92 199 - -
Pumo7g01854 415 MobiDBLite consensus disorder prediction 394 415 - -
Pumo7g01854 415 CDD STKc_IRAK 130 410 - -
Pumo7g01854 415 Pfam Protein kinase domain 127 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01854 415 ProSiteProfiles Protein kinase domain profile. 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01854 415 FunFam Serine/threonine-protein kinase 200 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01854 Pumo-Chr7 49243593 49245481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01854 114 412 Trihelix Transcription Factor Family AT5G38560 43.377 1.10e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g01854 Pkinase 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01854 - - gmx:100808408 554.288