Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01853 ATGCGAATGGCGTCGTCAACACTATTTTTTGTTCTTGTTTCGCTGATTTTCCACAATATTCAGCACTCAGGTTCATTCTCCCTCTCTGTGGAGAACCTTGAAGAAGACGTTATAGTGTCATCACCCAAAGGAACATTCACTGCAGGGTTTTACCCGGTAGGGGATAACGCATACTGTTTCGCAATATGGTACACCCAACCACCTCACACCCGTGTTTGGATGGCCAACCGGGACCAGCCGGTAAATGGAAAACGCTCAACGCTTTCCCTTCTCAAAACCGGTAACCTCGTATTAACCGACGCGGGTCAGTTCACTGTGTGGTCCACAAACACCGCCACCTCATCGAAACAAGTCCAGTTACATTTGTACGACACCGGCAACCTCGTCCTCCTCGACAACCAAAACCTTGTTGTGTGGCAAAGCTTCGATTTCCCAACGGACACGCTTCTTCCTGGTCAAACTCTCACGAAGAACACCAATCTTGTTTCCTCAAGAAGCGGGACCAACTATTCTTCCGGTTTCTACAAGCTCTCCTTCGACTCCGAGAACGTTCTCCGCCTCATGTACCAAGGCCCTCGTATTTCAAGCGTTTACTGGCCATATCCTTGGCTTCTGAACAATAATTTAGGAAATGGTGGTACGGGTAATGGTAGAACCTCTTACAACGATAGCAGGGTTGCTGTTCTAGATGATTTCGGCTACTTTGTTTCTTCCGATAACTTCACTTTCAAAACAAGTGATTACGGGACGGTGCTCCAACGGAGATTGACCCTCGATCACGACGGTAGTGTGAGGCTGTATAGCAAGAACGATGGAGAAGACAAGTGGACAATTTCAGGGGAATTTCGCTCACATCCCTGTTACGTTCATGGGATTTGTGGACCCAATAGTTATTGCAGTTACCAGCCTACAAGTGGTGGAAAGTGTTCCTGCCTTCCAGGTCATACCTGGGTTGATAGTCAAGACTGGTCTCAAGGTTGTGCACCAAATTTCAAACATTTATGCAACAACACCACCGAGTATGAGTCTCGCTTCTTGCACTTACCTAGTGTTGGTTTCTATGGATACGACTATGGTTACTTTGGAAATTACAGCTACAGACAATGTGAGAAACTGTGTTCGCAATTGTGCGAATGCAAAGGGTTTATGTACTTTTCAGAGGAAAATGATTTCTTTGAGTGCTACCCAAAGACGCAGTTGCTAAATGGGAATAGTCAAACGGGTTTCGAGGGATCATTCTTCTTGCGACTGCCTTTGTCCTCCCATGATGAGTATGAGAACCCCAACCAAAATAATGATAGTGGCTTGGTTTGTGGGGGAGATGGTGGAGGAGCGAAACTACTGGAGAGACCGTACGTGGAAGAAAAACAAAATGGATCGGTGAAGCTCATGCTATGGTTTGCGAGTGCCTTGGGAGGAATTGAGGTTGTCTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAACAATCGGACATTACACTCGGGTGGTGACAAACAGGGCTATGTTCTTGCAGCAGTTGCGGGGTTTCGAAAATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGCTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGTATTGTGTATAAGGGTGTCTTGTCTGATAATCAAGTTGTGGCGATAAAACGATTGCATGAAGTAGCGAACCAAGGAGAGAGTGAGTTCTTGGCTGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGGCATGTTGGGGTATTGTGTAGAGGGAAAGCATAGGTTGTTGGTTTATGAGCACATGGAGAATGGTTCTTTAGCTCAGAACCTTGCATCAAGTACGAATGTGCTTGACTGGAGTAAGAGGTACAATATTGCTCTTGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGACTATAAACCAAAGGTGGCAGATTTTGGCTTGTCTAAGCTACTAAACCGGAGCAGCAACCTCAATAATTCAAGCTTCTCGAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAGTGGGTTTTCAACTTGCCAATCACCTCCAAGGTGGATGTTTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGGAGGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAAAGTCACCTCATCAAGAGAGGTTGGTGACATGGGTGAGGGACAAAAGGAAGAAAGGATCAGAAATGGGATCATCTTGGGTGAATCAAATTGTTGATCCTGCTTTGGGATCAAACTATGACATCAATGAATTGGAGATATTGGCAACTGTGGCTTTGGAATGTGTAGAGGAAGAAAAAGACGCGAGACCCAGCATGAGTCAAGTTTCTGAGAGGCTCCAAAGACATGAACACCATTCTTGA 2445 0.4552 MRMASSTLFFVLVSLIFHNIQHSGSFSLSVENLEEDVIVSSPKGTFTAGFYPVGDNAYCFAIWYTQPPHTRVWMANRDQPVNGKRSTLSLLKTGNLVLTDAGQFTVWSTNTATSSKQVQLHLYDTGNLVLLDNQNLVVWQSFDFPTDTLLPGQTLTKNTNLVSSRSGTNYSSGFYKLSFDSENVLRLMYQGPRISSVYWPYPWLLNNNLGNGGTGNGRTSYNDSRVAVLDDFGYFVSSDNFTFKTSDYGTVLQRRLTLDHDGSVRLYSKNDGEDKWTISGEFRSHPCYVHGICGPNSYCSYQPTSGGKCSCLPGHTWVDSQDWSQGCAPNFKHLCNNTTEYESRFLHLPSVGFYGYDYGYFGNYSYRQCEKLCSQLCECKGFMYFSEENDFFECYPKTQLLNGNSQTGFEGSFFLRLPLSSHDEYENPNQNNDSGLVCGGDGGGAKLLERPYVEEKQNGSVKLMLWFASALGGIEVVCIFLVWCFLFRNNRTLHSGGDKQGYVLAAVAGFRKFSYSELKQATKGFSEEIGRGAGGIVYKGVLSDNQVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCVEGKHRLLVYEHMENGSLAQNLASSTNVLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVADFGLSKLLNRSSNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITELEAKSPHQERLVTWVRDKRKKGSEMGSSWVNQIVDPALGSNYDINELEILATVALECVEEEKDARPSMSQVSERLQRHEHHS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01853 814 MobiDBLite consensus disorder prediction 793 814 - -
Pumo7g01853 814 FunFam Serine/threonine-protein kinase 599 814 - -
Pumo7g01853 814 CDD B_lectin 40 145 IPR001480 -
Pumo7g01853 814 ProSiteProfiles Protein kinase domain profile. 523 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01853 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 163 IPR036426 -
Pumo7g01853 814 SMART serkin_6 523 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01853 814 Pfam S-locus glycoprotein domain 240 315 IPR000858 GO:0048544
Pumo7g01853 814 SUPERFAMILY Protein kinase-like (PK-like) 506 808 IPR011009 -
Pumo7g01853 814 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Pumo7g01853 814 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Pumo7g01853 814 SMART blect_4 29 145 IPR001480 -
Pumo7g01853 814 PIRSF SRK 1 813 IPR024171 GO:0004674
Pumo7g01853 814 Pfam Protein kinase domain 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01853 814 Pfam D-mannose binding lectin 70 161 IPR001480 -
Pumo7g01853 814 PANTHER OS07G0415500 PROTEIN 7 808 - -
Pumo7g01853 814 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Pumo7g01853 814 FunFam S-receptor-like serine/threonine-protein kinase 492 598 - -
Pumo7g01853 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Pumo7g01853 814 Gene3D Phosphorylase Kinase; domain 1 494 598 - -
Pumo7g01853 814 CDD STKc_IRAK 529 809 - -
Pumo7g01853 814 CDD PAN_AP_plant 344 418 - -
Pumo7g01853 814 Gene3D Transferase(Phosphotransferase) domain 1 599 814 - -
Pumo7g01853 814 Gene3D - 28 144 IPR036426 -
Pumo7g01853 814 FunFam Putative receptor protein kinase ZmPK1 18 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01853 Pumo-Chr7 49223335 49226059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01853 513 811 Trihelix Transcription Factor Family AT5G38560 44.040 1.39e-69 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g01853 Pkinase 7.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01853 - - gmx:100784990 1365.52