Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01852 ATGGCCACTTCAACATTCTTACTACCTCTTATTGTTTATCTAATTCTCCATAATTTTCAGCACTCATGCTCATTCTCCCTGTCCGTGGAGAAACTCAAAGAAGACGTAATAGTGTCATCGCCAAAAGGAACATTCACAGCAGGGTTTTACTCCGTAGGAGAAAACGCATTCTGCTTCGCAATATGGTACACACAACCACCTCACACCGTAGTTTGGATGGCCAACCGGGACCAGCCGGTAAACGGAAAACGCTCCACGCTTTCCCTTCTCAAAACCGGTAACCTCGTACTAACCGACGCGGACCAGTTCCCCGTGTGGTCCACAAACACCGTCACCTCATCCAAACATCTCCACCTCCATTTGTACGACACCGGCAACCTTGTTCTCCTCGACAAGGAAGACCGTCTGTGGCAAAGCTTCGATTTCCCAACGGACACGCTTCTTCCTAATCAAATTCTGAGCAAGAGCACCAGCCTCGTTTCCTCGAGAAGCGACACAAATTACTCCTCCGGTTACTACAAGCTCTTCTTCGACTTTGAAAATGTTCTCCGCCTCATGTACCAAGGCCCTGGAGTTTCCAGCATTTACTGGCCACATCCTTGGCTTCTGAGCAACAATTTCGGTAACGGTAACGGCAGATCCACTTTCAATGATACCAGGGTTCTTGTACTAGATCATTTCGGCAGCGTTGCTTCTTCCGATAACTTCACTTTCAGAACAAGTGATTACGGGGTTATGCTCCAACGGAGATTGACCCTCGATCACGACGGAAACGTTCGTGTCTATAGCAAGAAAGAAGGAGAAGACAAGTGGTTGGTGTCAGGGCAATTTAGACCCCAACCTTGTCTTCTTCATGGGATTTGTGGACCCAATAGTTATTGCAGCCACGAGCCAATAACTGGAAGAAAGTGTTCGTGCCTTCCAGGGTATAGCTGGGTTGATAGTGAAGACTGGTCTCAAGGTTGCGTACCCAATTTCAAACATTTTTGCAACAACACTCAGCAAGAGTCTCGCTTCCTGCGCTTACCCGAAGTTGATTTTTACGGATACGACTATGGACTCTTTCAGAATCGCACTTATAAAGAATGTGAGAATCTGTGCTTGGGGTTGTGTGAATGCAAAGGGTTTCAACACAGCTTTTCGGAGGGAAATGGTGTTAGTGATCAGTGTTACCTGAAAACGCGGTTGCTAAATGGCCATCATTCACCCGGTTTCACCGGGGCATTCATCCTGCGAGTGCCTTTGTCCCGTCAATATGATGAGAGGAACATTTTAAATAATGGCAATGGCTTGGTTTGTGGGGGAAACAGTGGGGGAGGAGCGAAAGTTCTACAGAGACAGTATGTCCAAAGAAAAGAAAATGGGAAGGTGAAGTTCATGTTGTGGTTTGCGATTGCCTTGGGACAAATTGAGGTCGTCTGCTTCCTTTCGGTGTGGTGTTTTTTGTTTAGGAATAATGGGACATTAAATAAACAAGGGTATGTTATTGCGGCCGCAACGGGGTTTAGGAAATTCAGTTACTCTGAACTGAAACAAGCCACCAGAGGTTTCAGTGATGAGATTGGAAGGGGTGGTGGAGGTACAGTGTACAAGGGTGTCTTGTCTGATAATCGGGTGGATGTCTACAGCTACGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAACAGGTATCCAAATCACAACAGAATTAGAAGCAGAGTCAAATCATCACGAGGGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAGTGGGATCATCTTGGGTGGATCAAATCGCTGACCCTGCTTTGGGATCAAACTATGACATGAATGAGATGAAGATATTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAACGTGAGACCATGCATGAGTCAAGTTGCTGAGAGGCTCCAAAGTCATGAACATCATTCATGA 1947 0.4638 MATSTFLLPLIVYLILHNFQHSCSFSLSVEKLKEDVIVSSPKGTFTAGFYSVGENAFCFAIWYTQPPHTVVWMANRDQPVNGKRSTLSLLKTGNLVLTDADQFPVWSTNTVTSSKHLHLHLYDTGNLVLLDKEDRLWQSFDFPTDTLLPNQILSKSTSLVSSRSDTNYSSGYYKLFFDFENVLRLMYQGPGVSSIYWPHPWLLSNNFGNGNGRSTFNDTRVLVLDHFGSVASSDNFTFRTSDYGVMLQRRLTLDHDGNVRVYSKKEGEDKWLVSGQFRPQPCLLHGICGPNSYCSHEPITGRKCSCLPGYSWVDSEDWSQGCVPNFKHFCNNTQQESRFLRLPEVDFYGYDYGLFQNRTYKECENLCLGLCECKGFQHSFSEGNGVSDQCYLKTRLLNGHHSPGFTGAFILRVPLSRQYDERNILNNGNGLVCGGNSGGGAKVLQRQYVQRKENGKVKFMLWFAIALGQIEVVCFLSVWCFLFRNNGTLNKQGYVIAAATGFRKFSYSELKQATRGFSDEIGRGGGGTVYKGVLSDNRVDVYSYGIVVLEMITGRSPTTGIQITTELEAESNHHEGLVTWVREKRMKGSEVGSSWVDQIADPALGSNYDMNEMKILATVALECVEEEKNVRPCMSQVAERLQSHEHHS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01852 648 Pfam S-locus glycoprotein domain 228 311 IPR000858 GO:0048544
Pumo7g01852 648 FunFam Putative receptor protein kinase ZmPK1 17 142 - -
Pumo7g01852 648 Pfam D-mannose binding lectin 69 155 IPR001480 -
Pumo7g01852 648 CDD B_lectin 39 143 IPR001480 -
Pumo7g01852 648 SUPERFAMILY Protein kinase-like (PK-like) 537 639 IPR011009 -
Pumo7g01852 648 ProSiteProfiles PAN/Apple domain profile. 330 424 IPR003609 -
Pumo7g01852 648 Gene3D Hepatocyte Growth Factor 341 408 - -
Pumo7g01852 648 Gene3D - 27 142 IPR036426 -
Pumo7g01852 648 PANTHER OS07G0415500 PROTEIN 538 643 - -
Pumo7g01852 648 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Pumo7g01852 648 Gene3D Transferase(Phosphotransferase) domain 1 511 648 - -
Pumo7g01852 648 CDD PAN_AP_plant 330 414 - -
Pumo7g01852 648 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 199 IPR036426 -
Pumo7g01852 648 SMART blect_4 29 143 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01852 Pumo-Chr7 49211180 49213600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01852 532 646 Trihelix Transcription Factor Family AT5G38560 36.522 1.31e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01852 - - gmx:100786566 824.313