Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01849 ATGCGAATGGCCTCATCCACATTCTTACTACTACCTCTTCTCGTTTCTCTAATTTTCCATAATTTTCAGCACTCATTTTCATTCTCCCTCTCCGTAGAGAAACCGGAAGAAGACTTAATAGCGTCATCACCCAAAGGAAGATTCACAGCAGGGTTTTACCCCGTAGGAGAAAACGCATACTGCTTTGCAATATGGTACACCCAACCACCTCACACTCTTGTTTGGATGGCCAACCGGGACCATCCGGTAAACGGAAAACGCTCCAGGCTTTCCCTTCTCGGAACCGGTAACCTCGTACTAACCGACGCGGACCAGTTCCAAGTGTGGTCCACCAACACCCTCACCTCATCCAACCAAGTCCAGTTACGTTTGTACGACACCGGCAACCTCGTTCTCCTCGACGCCTCCAACGATGTTGTTCTGTGGCAAAGCTTCGATTTCCCAACGGACACGCTCCTTCCTAATCAACCTCTCAGCAAGAGCACCAACCTCGTTTCCTCGAGAAGCGGGACCAACTATTCCTCCGGTTACTACAGGCTCTTCTTCGACTTCGAGAATGTTCTGCGCCTCATGTACCAAGGCCCTAGAGTTTCCAGCGTTTACTGGCCATATGCTTGGCTTCAGAACAATAACTTCGGTAACAATGGGAACGGTAGATCCACTTTCAACGATACCAGGGCTGTTGTGCTCGATGATTTCGGCAAAGTGGTTTCTACCGATAACTTCACTTTCAGTACAAGCGATAACGGGACGGTGCTCCAACGGAGATTGACCCTCGATCACGACGGCAATGTGAGGCTGTATAGCATCAAAGACGGACAACACAAGTGGTCCATATCAGGAATATTTCGGCCACAACCTTGTTTTATTCACGGCATTTGTGGACCCAATAGTTATTGCCGTAATGACCCAACAAGTGGAAGAACGTGTTCCTGTCTTCCAGGTCACAGATGGGTTGATAGTGAAGACTGGTCTCAAGGTTGCGTACCCAATTTCCAGCCTTGGTGCAACAGCACTAAGCAAGGGTCTCACTTCCTGCGCTTACCCCAAATGGATTTTTACGGATACGACTATGGGCACTATCAGAATCGCACGTACCAACAATGTGTGAATCTGTGCTTGCGGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTCACGGAGCAAAGTGATTCTACTAGTCAGTGCTACCTGAAGACGCAGTTGCTAAATGGCCATCGTTCACCGAACTTCTTGGGAGAATTCAACCTGCGAGTGCCTTTGTCCCTCCAAGACTATGAAGAGGGGGCCATTCTGAATAATGGCAGTGGCTTGGTCTGTGGGGGAAATAGTAGTGGAGGAGAGACAGTTCTAGAGAGATCATATGTGAAAGAAAAAGAAAATGAGTTCGTGAAGTTCATGTTGTGGTTTGCGATTGCCTTAGGAGGAATTGAGCTCGTGTGCTTCTTTCTGGTGTGGTGTTTCTTGTTTAGGAACAATGCTGATAAACAAGGCTATGTTCTTGCCGTGGAGACGGGCTTTAGGAAATTCAGTTACTCTGAACTGAAAAAGGCCACCAAAGGTTTCAGTCAAGAGATAGGAAGGGGTGGTGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATGATCGAGTTGTGGCAATAAAGAGACTACATGAAGTAGCAAACCAAGGAGAAAGTGACAACCTCGATAATTCAAGCTTCTCGAGGATAAGAGGTACAAGAGGTTACATGGCACCGGAGTGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAAGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAAAGTCACCTCATCACGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGAAGAAGGGATCAGAAATGGGATCATCTTGGGTGAATCAAATCGTTGACCCTGCTTTGGGATCAGACTATGACAGTGAATAA 1989 0.4721 MRMASSTFLLLPLLVSLIFHNFQHSFSFSLSVEKPEEDLIASSPKGRFTAGFYPVGENAYCFAIWYTQPPHTLVWMANRDHPVNGKRSRLSLLGTGNLVLTDADQFQVWSTNTLTSSNQVQLRLYDTGNLVLLDASNDVVLWQSFDFPTDTLLPNQPLSKSTNLVSSRSGTNYSSGYYRLFFDFENVLRLMYQGPRVSSVYWPYAWLQNNNFGNNGNGRSTFNDTRAVVLDDFGKVVSTDNFTFSTSDNGTVLQRRLTLDHDGNVRLYSIKDGQHKWSISGIFRPQPCFIHGICGPNSYCRNDPTSGRTCSCLPGHRWVDSEDWSQGCVPNFQPWCNSTKQGSHFLRLPQMDFYGYDYGHYQNRTYQQCVNLCLRLCECKGFQHSFTEQSDSTSQCYLKTQLLNGHRSPNFLGEFNLRVPLSLQDYEEGAILNNGSGLVCGGNSSGGETVLERSYVKEKENEFVKFMLWFAIALGGIELVCFFLVWCFLFRNNADKQGYVLAVETGFRKFSYSELKKATKGFSQEIGRGGGGTVYKGVLSDDRVVAIKRLHEVANQGESDNLDNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSPTTGVQITELEAKSPHHERLVTWVREKRKKGSEMGSSWVNQIVDPALGSDYDSE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01849 662 Gene3D Transferase(Phosphotransferase) domain 1 569 612 - -
Pumo7g01849 662 SUPERFAMILY Protein kinase-like (PK-like) 507 624 IPR011009 -
Pumo7g01849 662 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Pumo7g01849 662 SMART blect_4 29 148 IPR001480 -
Pumo7g01849 662 CDD B_lectin 42 148 IPR001480 -
Pumo7g01849 662 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pumo7g01849 662 SMART serkin_6 520 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01849 662 Gene3D - 149 281 IPR036426 -
Pumo7g01849 662 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 203 IPR036426 -
Pumo7g01849 662 SMART ntp_6 340 419 IPR003609 -
Pumo7g01849 662 ProSiteProfiles PAN/Apple domain profile. 336 416 IPR003609 -
Pumo7g01849 662 Coils Coil 661 662 - -
Pumo7g01849 662 Gene3D Phosphorylase Kinase; domain 1 493 564 - -
Pumo7g01849 662 CDD PAN_AP_plant 336 420 - -
Pumo7g01849 662 PANTHER OS07G0415500 PROTEIN 563 633 - -
Pumo7g01849 662 Gene3D - 34 147 IPR036426 -
Pumo7g01849 662 Pfam S-locus glycoprotein domain 233 316 IPR000858 GO:0048544
Pumo7g01849 662 Pfam D-mannose binding lectin 72 162 IPR001480 -
Pumo7g01849 662 Gene3D Hepatocyte Growth Factor 347 411 - -
Pumo7g01849 662 Pfam Protein kinase domain 559 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01849 Pumo-Chr7 49180798 49183919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01849 568 662 Receptor kinase-like Gene Family AT1G53420 38.947 1.39e-11 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g01849 Pkinase 7.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01849 - - gmx:100807333 925.235