Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01844 ATGACAAATCAACCTGATGCAGCAGGCGAGGCAAGGCAAGGAAGAAGAAGAAGAATATTTGAAGAAAGGCAAGGCAGTTCCTCCAAAAGAATGGATCATGGAAAGGTATTGGAGGAGCTTGTGAGAGGGCGTGAATTTGCTAATCAACTTCGACAAGTGATGATTAATGGAAAAGGAGAAGATGAGTCACCAGCAACCACAACCCCATTTGTTCAAAGTCTTGTCAAGAACGTTCTCAGATCCTTCACCAACACCCTCTTCCTCTTGGACAAATACCCCTCTTATGAGATGCAACAAATGGACTCTTGCTTTCTCACTCCCACTACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGAGTTTCATCACTAAGAACAGAAGAGGCTGCTACAAGAGAAAAAGAAATACACAAGAATGGGAGGAGGTGTCGGAACAAACTCCAATAGTGGATGGCCACCAATGGAGAAAGTATGGCCAAAAAGAGATTCTCAAAGCCAAATACTCAAGGAACTACTACAGGTGCACTCACAAGTATGACCAGAATTGTCAAGCAGTAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCCTTGTATAAGACCACCTATTTTGGCCACCACACATGCAATGACTTGCTAAACTCTGAAATCATACTTGATTCCAATAATTCTCCTTCGGACAATTCCATATTGCTAAGCTTTAACAACCCAACCAAACAAGAGTGCCCCTTTTTATCATCTCTTCCCTCACCATCAGTGAACAAAGAGGAGGTGATTCCCCCATCTTCCTCAGATAATTACTTGCTCTCCCCAGAACCACCCACCTTAGATGATTCTTCAAGGCATAATAATAATAATAATGTCACTCTACCACCACCCGATCACTGGGATGCCATGTGTGATTCTGTTGACCTTGATGATGTCAACCTTTTGTTGAATTTTGATGATTAA 948 0.4198 MTNQPDAAGEARQGRRRRIFEERQGSSSKRMDHGKVLEELVRGREFANQLRQVMINGKGEDESPATTTPFVQSLVKNVLRSFTNTLFLLDKYPSYEMQQMDSCFLTPTTKSEDSQESCKSFITKNRRGCYKRKRNTQEWEEVSEQTPIVDGHQWRKYGQKEILKAKYSRNYYRCTHKYDQNCQAVKQVQRIQEDPPLYKTTYFGHHTCNDLLNSEIILDSNNSPSDNSILLSFNNPTKQECPFLSSLPSPSVNKEEVIPPSSSDNYLLSPEPPTLDDSSRHNNNNNVTLPPPDHWDAMCDSVDLDDVNLLLNFDD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01844 315 MobiDBLite consensus disorder prediction 245 269 - -
Pumo7g01844 315 MobiDBLite consensus disorder prediction 10 32 - -
Pumo7g01844 315 SUPERFAMILY WRKY DNA-binding domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01844 315 Pfam WRKY DNA -binding domain 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01844 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 40 227 IPR044810 GO:0003700
Pumo7g01844 315 Gene3D WRKY domain 132 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01844 315 MobiDBLite consensus disorder prediction 1 32 - -
Pumo7g01844 315 SMART WRKY_cls 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01844 315 MobiDBLite consensus disorder prediction 245 292 - -
Pumo7g01844 315 ProSiteProfiles WRKY domain profile. 143 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01844 315 MobiDBLite consensus disorder prediction 275 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01844 Pumo-Chr7 49130571 49132280 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01844 35 239 WRKY Transcription Factor Family AT3G56400 36.404 2.61e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g01844 WRKY 9.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01844 - - gmx:102670495 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01082 5 23594958 23596928 Pumo7g01844 7 49130571 49132280 PCT