Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01842 ATGGATCATGGAAAGGTATTGGAGGAGCTTGTGAGAGGGCGTGAATTTGCTAATCAACTTCGACAAGTGATGATTAATGGAAAAGGAGAAGATGAGTCACCAGCAACCACAACCCCATTTGTTCAAAGTCTTGTCAAGAACGTTCTCAGATCCTTCACCAACACCCTCTTCCTCTTGGACAAATACCCCTCTTATGAGATGCAACAAATGGACTCTTGCTTTCTCACTCCCACTACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGAGTTTCATCACTAAGAACAGAAGAGGCTGCTACAAGAGAAAAAGAAATACACAAGAATGGGAGGAGGTGTCGGAACAAACTCCAATAGTGGATGGCCACCAATGGAGAAAGTATGGCCAAAAAGAGATTCTCAAAGCCAAATACTCAAGGAACTACTACAGGTGCACTCACAAGTATGACCAGAATTGTCAAGCAGTAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCCTTGTATAAGACCACCTATTTTGGCCACCACACATGCAATGACTTGCTAAACTCTGAAATCATACTTGATTCCAATAATTCTCCTTCGGACAATTCCATATTGCTAAGCTTTAACAACCCAACCAAACAAGAGTGCCCCTTTTTATCATCTCTTCCCTCACCATCAGTGAACAAAGAGGAGGTGATTCCCCCATCTTCCTCAGATAATTACTTGCTCTCCCCAGAACCACCCACCTTAGATGATTCTTCAAGGCATAATAATAATAATAATGTCACTCTACCACCACCCGATCACTGGGATGCCATGTGTGATTCTGTTGACCTTGATGATGTCAACCTTTTGTTGAATTTTGATGATTAA 858 0.4172 MDHGKVLEELVRGREFANQLRQVMINGKGEDESPATTTPFVQSLVKNVLRSFTNTLFLLDKYPSYEMQQMDSCFLTPTTKSEDSQESCKSFITKNRRGCYKRKRNTQEWEEVSEQTPIVDGHQWRKYGQKEILKAKYSRNYYRCTHKYDQNCQAVKQVQRIQEDPPLYKTTYFGHHTCNDLLNSEIILDSNNSPSDNSILLSFNNPTKQECPFLSSLPSPSVNKEEVIPPSSSDNYLLSPEPPTLDDSSRHNNNNNVTLPPPDHWDAMCDSVDLDDVNLLLNFDD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01842 285 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01842 285 SUPERFAMILY WRKY DNA-binding domain 113 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01842 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 197 IPR044810 GO:0003700
Pumo7g01842 285 MobiDBLite consensus disorder prediction 215 239 - -
Pumo7g01842 285 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01842 285 MobiDBLite consensus disorder prediction 215 262 - -
Pumo7g01842 285 MobiDBLite consensus disorder prediction 245 260 - -
Pumo7g01842 285 Pfam WRKY DNA -binding domain 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01842 285 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01842 Pumo-Chr7 49116056 49117579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01842 5 209 WRKY Transcription Factor Family AT3G56400 36.404 8.63e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g01842 WRKY 8.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01842 - - gmx:102670495 399.053