Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01840 ATGGAACTTAATGCCCAAAACATTCCCCCCTTTGAAATTTCCCATCCTGGACGCCACAGGGTTCGTCCCAAAAGCAGCGTCCAATTTGATGATACCCTCTTCTTACATGATGACAATGCCAACCTCATCTATGTTAATGATCCCATCAAGACAAATGAAAAGTATGAGTTCTCCGGGAATGAGATCCAAACCAGCAGATACACTCTTCTCACGTTCTTGCCCAAGAATCTTTTCATTCAGTTTCACAGGGTTGCTTATCTCTATTTCCTTGCCATTGCCGCTCTCAATCAGCTTCCCCCGCTCGCTGTTTTTGGGCGAACTGTGTCCCTTTTCCCCCTCTTGTTTGTGCTTTGCGTCACAGCTATCAAGGATGCCTATGAGGATTGGCGCAGGCACAGGTCAGATCGCAATGAAAACAATCGAAAGTGTTCAGTTCTTCAATCTGCTCAGTTCCGCCCCAAGAAATGGAAAAAAATACAGGCTGGTGATGTTATTAAAATCTTTGCTGATGAGATGATTCCTGCTGACATGGTCTTGTTGGGGACAAGTGATCCGAGTGGGATTGCCTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCAAAGCAGGAAACAGCTTCAGCGGTGTTGCCAGACTCTTGTGCTGTTTCTGGAGTTATTAGATGTGAGCCACCTAATCGGAATATTTATGAGTTCACTGCCAACATGGAATTCAATGGTTGCAAGTTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGCATGCTGAAGAACACAGATTGGATAATTGGTGTGGTGGTTTATGCAGGACAGCAAACAAAAGCAATGTTGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACTTTTTGGTTGTCGGTTTTTCTTTTTATCATGTGTGCAGTTGTCGGCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAACATATTTCAATGATGGGCTGGATAAGGGAAAGAAATACAGGTATTATGGGATACCGATGGAAACATTCTTCTCCTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTATACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATAGAGGACAGGGATATGTATGATGCTAACTCTGAATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGTTACGTGTTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAGTTTCAGAGAGCTAGTGTACATGGAAAGAAATATGGGAGTTCCTTGCTTACGGATGATAAAAATACAGCAGCAGCAAATAGTGCTAAACGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATGGCATTGTTGCAGAAAGACTCAAATAGAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATTATTAGTAGCAGTACATGTGGAAAAGGAGAATCAAATGAACTCATAGAAGGTATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTATTTGAGCGAACATCTGGAAACATTGCTATTGACGTCAATGGCGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTGTCCGGTTTCCTGACAATGTTGTTAAGGTGTTGGTTAAAGGCGCTGACACTTCAATGCTTAGCATTTTAGCACCTGACAATGCAGGCAACAACAGCATACGGCATGAAACTCAGAGTCATTTAAGTGACTATTCTATGCAAGGTTTACGAACTCTTGTAGTTGCCTCCAGGGATCTTTCAGATGCCGAACTTGAGGAGTGGCAAAGCATGTATGAAGATGCGAGCACTTCATTGACTGATCGAGCTGCAAAACTACGTCAAACAGCGGCTCTTATAGAATGCAACCTAAAGCTACTTGGAGCAACTGCAATTGAGGACAAGCTGCAGGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTGCAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAATCTCTTGGCTGATGCTAAAGCGAAGTATGGTGTGAAATCTTCAAGTAGAGAACATCAGAATCTAAAGTGTAAAATTGATTCTAGACATGGTGGCCCTGATATTCCCAATGATACAAAATCCTTGAGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAGGAACTACTGCTCCATTGGCACTCATAATTGATGGAACCAGTTTGGTTTATATTTTGGAGAAGGAACTACAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCACACAGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTCCAGTTCTTGAAAAAATTGCTTCTAGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTATTTTATTCTGTGATATACACATCTATCCCTACTATCATTATTGGTGTTCTGGACAAAGACTTGAGTCATAGTACACTTTTGCAGTATCCAAAATTGTATGGTGCAGGTCACCGGCACGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACACTATGGCAGAGTCTTGTTCTCTTCTACATTCCTGTATTCATCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACGATTTCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATTAACCAATGGGCACTAGTTAGTCATGTTGCTGTATGGGGATCAATAATCATTACATATGGTTGCGTGGTGATATTGGATTCTATACCTGTCTTTCCCAATTACGGGACTATTTATCATTTGGCAAGTTCCCCTACATATTGGATGACAATTTTGCTTATAATAATTGTGGCATTGCTACCTCGCTTTCTTTGCAAAGCTGTTTATCAAATCTTTTGTCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGAAAACAGCATGATGATTTGCAGTCAAGGCTACCAGTTTCCAATTAA 3525 0.4156 MELNAQNIPPFEISHPGRHRVRPKSSVQFDDTLFLHDDNANLIYVNDPIKTNEKYEFSGNEIQTSRYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDRNENNRKCSVLQSAQFRPKKWKKIQAGDVIKIFADEMIPADMVLLGTSDPSGIAYIQTMNLDGESNLKTRYAKQETASAVLPDSCAVSGVIRCEPPNRNIYEFTANMEFNGCKFPLNQSNIVLRGCMLKNTDWIIGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETFWLSVFLFIMCAVVGLGMGLWLVRHKDQLDTLPYYRKTYFNDGLDKGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSESRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKKYGSSLLTDDKNTAAANSAKRRWKLKSEIAVDSELMALLQKDSNRDERIAAHEFFLTLAACNTVIPIISSSTCGKGESNELIEGIDYQGESPDEQALVSAASAYGYTLFERTSGNIAIDVNGEKLRLDVLGLHEFDSVRKRMSVVVRFPDNVVKVLVKGADTSMLSILAPDNAGNNSIRHETQSHLSDYSMQGLRTLVVASRDLSDAELEEWQSMYEDASTSLTDRAAKLRQTAALIECNLKLLGATAIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEVECRNLLADAKAKYGVKSSSREHQNLKCKIDSRHGGPDIPNDTKSLSMPKWNPGKEEGTTAPLALIIDGTSLVYILEKELQSELFDLATSCRVVLCCRVAPLQKAGIVDLIKSHTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIIGVLDKDLSHSTLLQYPKLYGAGHRHEAYNMQLFWITMIDTLWQSLVLFYIPVFIYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVAVWGSIIITYGCVVILDSIPVFPNYGTIYHLASSPTYWMTILLIIIVALLPRFLCKAVYQIFCPSDIQIAREAETMRKQHDDLQSRLPVSN 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01840 1174 Pfam E1-E2 ATPase 140 388 - -
Pumo7g01840 1174 Gene3D - 692 920 IPR023214 -
Pumo7g01840 1174 NCBIfam phospholipid-translocating P-type ATPase 57 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo7g01840 1174 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 709 IPR023299 GO:0000166
Pumo7g01840 1174 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1148 IPR032630 -
Pumo7g01840 1174 SUPERFAMILY Calcium ATPase, transduction domain A 140 282 IPR008250 -
Pumo7g01840 1174 SUPERFAMILY HAD-like 417 924 IPR036412 -
Pumo7g01840 1174 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1160 - -
Pumo7g01840 1174 SFLD C1.7: P-type atpase like 414 931 - -
Pumo7g01840 1174 SFLD p-type atpase 414 931 IPR044492 -
Pumo7g01840 1174 Gene3D - 115 286 - -
Pumo7g01840 1174 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Pumo7g01840 1174 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Pumo7g01840 1174 MobiDBLite consensus disorder prediction 787 806 - -
Pumo7g01840 1174 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Pumo7g01840 1174 NCBIfam HAD-IC family P-type ATPase 850 966 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01840 1174 NCBIfam HAD-IC family P-type ATPase 363 457 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01840 1174 NCBIfam HAD-IC family P-type ATPase 690 744 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g01840 1174 Pfam Cation transport ATPase (P-type) 542 617 - -
Pumo7g01840 1174 Gene3D - 539 672 IPR023299 GO:0000166
Pumo7g01840 1174 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1147 IPR023298 -
Pumo7g01840 1174 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Pumo7g01840 1174 FunFam Phospholipid-transporting ATPase 539 683 - -
Pumo7g01840 1174 CDD P-type_ATPase_APLT_Dnf-like 59 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01840 Pumo-Chr7 49082493 49087699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01840 35 1159 Primary Pumps ATPases AT5G04930 56.661 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01840 K14802 - gmx:100788740 2214.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01083 5 23610147 23617932 Pumo7g01840 7 49082493 49087699 PCT