Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01839 ATGGCTTCTCTGCTCCCTCCAACTGCTACTAGTTCCACACTTAAACACAACCAAATGGCTTCGGCTTCTCCCTTGAAACCGAACAATGCTTCTTTCTTATCAAATAACTCAAACCACCACCGTTTGAAGAGCAACTCTGCAAGTGCAAGGTGCCATGCATTGTTTGATGACGTGGCCAAAGGGTTGTTGGAGAGCAGCAGTGTTGGCGTGGAGCCGTTCCAGAGTGTGACTGAAGGCTTATCCGACATGCAGAGGTGGGGGTTCCTCGTGTTTGGTGGGTTGACGTGGATTTACTTGACTGCGAGGCCAGGTGTGCTTGTTGGTGCCATTGATGCGTACCTTTTGGCCCCTCTTCAACTGGGTTTGGACAGTTTGGCTGGAAGGAGGAACTTGAAGAGGAGTGACTTTGTGGTTGGAGACAAGCTTGGTGAAGGGTCCTTTGGTGTTAAGGTTGGAATCCAAGGGGCTGAGGAGTTTGGTGATTATGAGGAGTGGTTCAATTACAGGCTATCTAGGGCAGCACCCGAAACATGTGCTGACTTCCTTGGAAGTTTTGTAGCTGATCAAACTAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGCTGATTACATGAAAGATCGAAACTTTCCTTCAAACTTAGAATCTGTGATGTTTGGACGTGTCTTGCAAGGTGTAGACTCTTCGAAACGAAATGCATTGATCATCAAACAAATAATGCGCCAGATCATTACGTCTCTTAGAAAAATTCATGATACAGGCATTGTTCATAGGGATGTAAAGCCAGCCAACTTAGTGGTTACTAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGATCTGCGTATTGGAAAGAATTATGTTCCCAATCGTACCCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTCCCAGAAGAAACACCAAGTCCACCACCAGAGCCAATTGCTGCTTTCCTTTCACCAATCCTGTGGCAGTTAAACAGCCCTGATTTGTTTGATATGTATTCAGCTGGGATTGTACTCCTGCAAATGGCAATACCAAGCTTAAGGTCTCCTGCTGCTTTGAAGAATTTCAACTTGGAACTGAAAACCTGTGGATATGATTTGAAAAAATGGAGGGACTATACTCGCCTCAGGCCTGACTTTCAAATTCTAGATAGTGAATCTGGTAGAGGGTGGGACTTAGCAACAAAGCTTGTATCTGAGAGAGGTTCCCTAAGAAGAGGACGTTTATCTGCAGCTGCTGCTCTGCGACATCCTTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTCCTTTCAAAATTAAGCTTGAACAGAAAGTGA 1374 0.4505 MASLLPPTATSSTLKHNQMASASPLKPNNASFLSNNSNHHRLKSNSASARCHALFDDVAKGLLESSSVGVEPFQSVTEGLSDMQRWGFLVFGGLTWIYLTARPGVLVGAIDAYLLAPLQLGLDSLAGRRNLKRSDFVVGDKLGEGSFGVKVGIQGAEEFGDYEEWFNYRLSRAAPETCADFLGSFVADQTNSQFTKGGKWLVWKFEGDRTLADYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSPAALKNFNLELKTCGYDLKKWRDYTRLRPDFQILDSESGRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLNRK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01839 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 27 149 - -
Pumo7g01839 457 SMART serkin_6 136 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01839 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pumo7g01839 457 Gene3D Transferase(Phosphotransferase) domain 1 236 440 - -
Pumo7g01839 457 Gene3D Phosphorylase Kinase; domain 1 148 205 - -
Pumo7g01839 457 MobiDBLite consensus disorder prediction 1 27 - -
Pumo7g01839 457 SUPERFAMILY Protein kinase-like (PK-like) 132 439 IPR011009 -
Pumo7g01839 457 Pfam Protein kinase domain 245 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01839 457 ProSiteProfiles Protein kinase domain profile. 136 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01839 Pumo-Chr7 49074068 49078289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01839 136 294 MAP Kinase Kinase Kinase AT3G13530 26.012 1.78e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pumo7g01839 Pkinase 4.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01839 - - gmx:100786843 782.711