Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01768 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCCTCAGATTCATTTTCAGTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCTAGCCCTCCCACTTCCTCCTCCACAATGTCCTCTTCTCTTGGCAGCAACAACAGCACCAGCAAGGGTGGTGGTGGCAGTGGCACTTCAGCCAACACCACCACCACCACCACTGCTGCTGCAGCCCCAACACCCTCTGACAACAACCCTCCTCAGGAATCCAGCCCTGAAAAATGTGGCATCAGGATGGAGGACTGGGAGGGTCAAGATCAATCCATCCTGAGACTAATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCCTGCAAAGCACTGCCTGTGGTTCTCAAAGTGTTGATTTCAATGCTGGCTTTGGTGTTGTGGATCAAGGGTTGAATATGAATATGAATATGAATATGGTGAGTGCTAATACTGACCCTTCTGGGAATTACTCTGCTGGTTTCTCTTTCATTGCTGAGAATATTGATGGCCATAATGCCAAGGCTGGTTCTGGGACTGGCCAGGTTTCAGAATCTGTTGTTTTCTCTGCCAACAATCCTCTCATGGTGTCATCATCTGTGTCTCCTGGTGTGTTCACTTCTCAGCAGCAGCAGGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATCAACCCACAGTTTATGTTGAACCAGAACCAAGTTCAGTTCTCAGAGAACCCTTCTTTCTTTGTGCCATTGATGTACCCCCAAGTGCAGGAGCAGCAGGTTTTCTCTCAGCATCAAGCAAAACGCCCTCTCTTTGACACAATTGGGCACAATTTTCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCACCATATCCAACAACAATCAATGGTTATGCCCTCTGCTAAACAGCAGAAGGTGGGTTCCACCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATCTTCACAGTTTCATGGCTTTTTCGCCTATTAGTTTCATATTCAAAATTGGAGCTTATAAGTCCTTTTCTGAGATATCACCTGTTCTCCAGTTTGCCAATTTTACTTGCAACCAAGCCCTCATTGAAGCTGTGGAAAGGTTTGACCGAATTCATGTTATTGATTTCGATATCGGGTTTGGAGTGCAGTGGTCATCTTTTATGCAAGAGCTTGCCTTGAGAAGTAGTGGCGCACCTTCACTCAAAGTCACTGCCATTGTGTCTCCCTCCACTTGTGATGAGGTTGAGCTCAATTTCACTAGAGAGAATTTGATTCAATACGCGAAAGACATCAACATGTCATTTGAATTCAATGTTTTGAGCATTGAATCATTGAACTCTCCTTCCTGTCCACTGCTAGGCCAATTCTTTGATAACGAGGCAATTGCGGTGAATATGCCGGTTTCAAGTTTCACAAACTATCCATCATTGCTCCCTTCAGCTCTTCACTTTGTGAAACAGCTCAGGCCAAAGGTTGTGGTCACTTTGGACAGAATTTGCGATCGAATTGATGTACTGCTTCCCACCAATGTAGTCCATGTCCTCCAATGTTATTCGGCCTTGCTCGAATCACTGGACGCGGTGATTGTGAATCTTGATGTCCTCCAGAAGATTGAGAGGCATTTCATCCAACCAGCCATCAAGAAGATTATACTTGGTCACCACCATTCTCAAGAAAAATTACCCCCATGGAGGAGCCTCTTTATACAATCTGGATTCTCTCCATTCACATTTAGCAACTTCACAGAAGCTCAAGCTGAGTGTCTAGTCCAGAGGGCATCTGTAAGGGGATTTCATGTGGAGAGAAAGCCTTCGTCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA 2193 0.4633 MKAMPLPFEEFQGKGVLDFSSASDSFSVLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNNSTSKGGGGSGTSANTTTTTTAAAAPTPSDNNPPQESSPEKCGIRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQGLNMNMNMNMVSANTDPSGNYSAGFSFIAENIDGHNAKAGSGTGQVSESVVFSANNPLMVSSSVSPGVFTSQQQQEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQEQQVFSQHQAKRPLFDTIGHNFQAPRLPLLDSGQEVFGRRQQTQLPLFPHHIQQQSMVMPSAKQQKVGSTGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNLHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQELALRSSGAPSLKVTAIVSPSTCDEVELNFTRENLIQYAKDINMSFEFNVLSIESLNSPSCPLLGQFFDNEAIAVNMPVSSFTNYPSLLPSALHFVKQLRPKVVVTLDRICDRIDVLLPTNVVHVLQCYSALLESLDAVIVNLDVLQKIERHFIQPAIKKIILGHHHSQEKLPPWRSLFIQSGFSPFTFSNFTEAQAECLVQRASVRGFHVERKPSSLVLCWQRKELISVSTWRC 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01768 730 ProSiteProfiles GRAS family profile. 363 729 IPR005202 -
Pumo7g01768 730 MobiDBLite consensus disorder prediction 51 120 - -
Pumo7g01768 730 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 334 725 IPR005202 -
Pumo7g01768 730 MobiDBLite consensus disorder prediction 51 116 - -
Pumo7g01768 730 Pfam GRAS domain family 374 729 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01768 Pumo-Chr7 46721683 46724930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01768 350 730 GRAS Transcription Factor Family AT4G00150 53.125 6.87e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo7g01768 GRAS 2.2e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01768 - - gmx:100801785 1235.32