Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01741 ATGAACGGCAACCCATACTTTAACCTGGTGCTGGTGTACAACGTGGGAGCGGTAGGAGACGTGAAAGCAGTGTCAATAAAAGGGTCAACAATTGGGTGGCAACCAATAACCAGAAACTGGGGGCAAAATTGGCAGAACAACACATACCTCGTTGGCCAAAGCATCTCCTTCACAGTCACAACTAGCGACGGTCGATCAGTCACCAGTCTCAATGTGGTGCCTGCTGGTTGGAAATTTGGACAAACCTTCGAAGGTCGTCAATTTTAA 267 0.4794 MNGNPYFNLVLVYNVGAVGDVKAVSIKGSTIGWQPITRNWGQNWQNNTYLVGQSISFTVTTSDGRSVTSLNVVPAGWKFGQTFEGRQF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01741 88 Pfam Expansin C-terminal domain 1 74 IPR007117 -
Pumo7g01741 88 FunFam Expansin 1 88 - -
Pumo7g01741 88 PANTHER EXPANSIN-A15 1 88 IPR002963 GO:0009664
Pumo7g01741 88 PRINTS Expansin/Lol pI family signature 71 85 IPR007118 GO:0005576
Pumo7g01741 88 PRINTS Expansin/Lol pI family signature 33 47 IPR007118 GO:0005576
Pumo7g01741 88 PRINTS Expansin signature 7 28 IPR002963 GO:0009664
Pumo7g01741 88 PRINTS Expansin signature 42 63 IPR002963 GO:0009664
Pumo7g01741 88 PRINTS Expansin signature 71 87 IPR002963 GO:0009664
Pumo7g01741 88 SUPERFAMILY PHL pollen allergen 1 85 IPR036749 -
Pumo7g01741 88 Gene3D - 1 88 IPR036749 -
Pumo7g01741 88 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 6 85 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01741 Pumo-Chr7 45824226 45824492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01741 1 88 Expansin Gene Family AT5G05290 68.539 4.94e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01741 - K20628 gmx:100797425 161.384