Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01735 ATGAGTGATCGAGCCACAACAACAACAAGAGCCATGCACAAAGGGAGAATAGGAGGCAAGGCTCAGCTTGGATATGTTGAAACTGACCCTTCTGGTCGATATGGACGTTTCAGGGACATTCTAGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAGGTCCTAGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTGTTTCATTCACCAGATCTACTTCAGAGGCTTTACTCAGAGGTTCATCTCCTCAAGAACTTGGAACATGACTCTATCATGACCTTCCATGATTCTTGGATTGATGTCAATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTATAGAAAGAAGTACCAGCGAGTAGATATCAGAGCAGTGAAGAATTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTGCACAGCCATGATCCTCCTGTGATACATAGAGACCTCAAGTGTGACAATATCTTCATCAATGGCCATTTGGGGCAGGTCAAGATTGGTGACTTGGGCCTTGCAGCCATTCTCCGTGGCTCCCAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAGCTGGTAGACATATACTCCTTTGGGATGTGCATGATAGAAATTTTTACGTCTGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAGATATACAAGAAAGTTACTTCGGGGAAGCTGCCAGAAGCCTTTTACAGAATCCATGACTTGGAAGCCCAGAGGTTTGTGGGAAAGTGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACCCATTTTTAGCTAAGGACCAATTAGACTCTCCACTCCCTAGCCCAACATTACCCAGAAAACAAACCCCCACACTCAATTTCACTGCATCACTTGCCAAAGAGCTACCTCCACCAAAGAGTAACCAAGCAAAGGACACACACATGACAATCACTGGATCAATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAAATGGGGAAAAGAGAAACATATTCTTTCCATTTGACACCATAAACGACACTGCCATTGATGTGGCAGTGGAGATGGTTAAAGAACTGGAGATTAGTGACTTGGAACCATTGGAGATTGCTGAAATGATTGAGGAGGAGATATCAGCTTTGGTCCCAACATGGAGGGACTGGGGCACTTCTAAGTATCAAAAACAGCATAGTTTTAGCTATGAAGAAGAGTATGATATGAGTAACCACCACCCTTTCTTCTCACCATCCTCTCGCTCTTCCTCTCATGCTTCTCTTCCAGTATTTGGTTCTTCCTACAAGAATAATCCCCACCTTCGTGGGAACCATTACCCTTTTGCTCAAGATTGGCCTCAAGATGAACTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATTTCAATTGCTGCGACCCCGGCAATGAAGATGAGCATGATCCAAGTCTAGTACTAGGAGCAGAACCCCTTTGCTACACCCCAAAAGGCAATGAAAAGTGCACAAGATTCTGTCCTAGAGAAGAAGTGATGGATGCTGATTTCACCAAACAGTTTTGCAACATGAGAATGGATTCTCACAGTTGTCATGGAATGCACAGGCTAACCAGGATAAGTTCCTTTGTGGATCTGAGGAGACAGCAACTGCAACGATCACTGATGGAGGAGATTCACAAGAGGAGGATGTTCAAGACGGTTGGTGCCATTGAGAACATTGGGTTTCAGAATCCAGAAGGAGATGGATGTTTTTCTTATTGA 1863 0.4407 MSDRATTTTRAMHKGRIGGKAQLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLQRLYSEVHLLKNLEHDSIMTFHDSWIDVNCRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEIFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLAKDQLDSPLPSPTLPRKQTPTLNFTASLAKELPPPKSNQAKDTHMTITGSMNEEDDTVFLKVQISNKNGEKRNIFFPFDTINDTAIDVAVEMVKELEISDLEPLEIAEMIEEEISALVPTWRDWGTSKYQKQHSFSYEEEYDMSNHHPFFSPSSRSSSHASLPVFGSSYKNNPHLRGNHYPFAQDWPQDELFMNDDASSQSSMNSFKCFNFNCCDPGNEDEHDPSLVLGAEPLCYTPKGNEKCTRFCPREEVMDADFTKQFCNMRMDSHSCHGMHRLTRISSFVDLRRQQLQRSLMEEIHKRRMFKTVGAIENIGFQNPEGDGCFSY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01735 620 Pfam Protein kinase domain 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01735 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Pumo7g01735 620 ProSiteProfiles Protein kinase domain profile. 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01735 620 SUPERFAMILY Protein kinase-like (PK-like) 37 294 IPR011009 -
Pumo7g01735 620 FunFam Probable serine/threonine-protein kinase WNK1 20 116 - -
Pumo7g01735 620 SMART serkin_6 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01735 620 FunFam probable serine/threonine-protein kinase WNK9 118 298 - -
Pumo7g01735 620 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 496 - -
Pumo7g01735 620 CDD STKc_WNK 33 293 - -
Pumo7g01735 620 Gene3D Transferase(Phosphotransferase) domain 1 118 299 - -
Pumo7g01735 620 Gene3D Phosphorylase Kinase; domain 1 20 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01735 Pumo-Chr7 45749750 45755421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01735 23 435 MAP Kinase Kinase Kinase AT3G51630 68.841 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo7g01735 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01735 K08867 - gmx:100816187 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01057 5 23366604 23371486 Pumo7g01735 7 45749750 45755421 PCT