Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01734 ATGGGGAATCACAGGTTTAAGTTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGGGACATGGGTAGAGGAAGAGATTCAAGAAAGCAAAGCACCACACCTTCTAGGAAAAAGAAGCAAAATTCATCCCCTTCAACCACACATTCATCAAAACCAAACCAACCCCACCACCAATACAACAACAACAACAACAACAACCCCAGAAAGTCCTACTACTTCACAAGAGACCTCAAAACCTCACCCTCAAACACCCCAAAAATTTCCCCTCCTAGAAAATCAACCAAACAAAGAACCAAAAGAAAAATTTCCCCAAAACTTGTCTCCTCAAGTTGTAGCTGCCGCACCACCCTTGAATCCATATGGACCAAATCAGATTCCCCACCAGAACACTCTTCCTCATCCCCATTTGACACCTCACCAGAGTCACAATCCCCAGAATTCAGAACAGACCGTGTTCTCCCATGTTCCTCATCATTCGATGAAATGGTTTCCTTGTCCACCACCTCTTGCGCCTCTTGCAGGCTTAACACAAACAAAAACAACCCCACCAACGACACCATCATAGACGTGGACAAAAACTCCATAGCAAGAAGAAAAGATAACAAGCTTGATGGCTACTACAATTACAACCACAACAACAATGACTATGATGACACCTTCTCAGAACTCGAGCTTCCTCCAATCATAACCAAGCCACCAAAGATGTTAAAGAAGAGAGAACTCAAACAAGGGTCCTTGAAGCTGAGAATTGTGAAGGAAGACTCTGCAAAGAAGGAACAGAGGAATGGTGGTTCTTTGAGGAGACTATCTGTGAGTTCTCCCGGGGTGAGGCTGAGGGTCCACTCGCCGAGAATTGCCGGCATGAAGGGGCGAAAAAGCGTGTCTTCGACGGCGAGTTCCGGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTTGTGAAGTCATCTTTTGACCCACAGAAGGATTTCAAGGAATCCATGATGGAGATGATTGTGGAGAACAACATAAGGGCATCCAAGGACTTGGAGGATCTACTTGCTTGCTACCTCTCTCTCAATTCAGATCAGTATCATGACCTCATCATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTCAATCAAGGTAG 1137 0.4494 MGNHRFKLSDMIPNAWFYKLRDMGRGRDSRKQSTTPSRKKKQNSSPSTTHSSKPNQPHHQYNNNNNNNPRKSYYFTRDLKTSPSNTPKISPPRKSTKQRTKRKISPKLVSSSCSCRTTLESIWTKSDSPPEHSSSSPFDTSPESQSPEFRTDRVLPCSSSFDEMVSLSTTSCASCRLNTNKNNPTNDTIIDVDKNSIARRKDNKLDGYYNYNHNNNDYDDTFSELELPPIITKPPKMLKKRELKQGSLKLRIVKEDSAKKEQRNGGSLRRLSVSSPGVRLRVHSPRIAGMKGRKSVSSTASSGSRRSLSDSFAVVKSSFDPQKDFKESMMEMIVENNIRASKDLEDLLACYLSLNSDQYHDLIIKVFKQIWFDLTQSR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01734 378 MobiDBLite consensus disorder prediction 38 93 - -
Pumo7g01734 378 ProSiteProfiles OVATE domain profile. 314 373 IPR006458 -
Pumo7g01734 378 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Pumo7g01734 378 NCBIfam uncharacterized plant-specific domain TIGR01568 312 375 IPR006458 -
Pumo7g01734 378 Pfam Transcriptional repressor, ovate 318 374 IPR006458 -
Pumo7g01734 378 MobiDBLite consensus disorder prediction 124 151 - -
Pumo7g01734 378 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 49 376 IPR038933 GO:0045892
Pumo7g01734 378 MobiDBLite consensus disorder prediction 23 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01734 Pumo-Chr7 45724647 45726400 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo7g01734 Ovate 5.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01734 - - gmx:100785362 577.785