Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01731 ATGCTAGACGAACAAAACGGTGCCGTCACAGGCACAGAGACAACAAAAACATCATCGACGACAAAGGACGAGGAAGTTGCAGGTGTCGTTTTGTTCGGAAAATACGAGATTGTCAAGTTACTAGGCGTTGGCGCGTCCGCGAAGGTGTACCACGCGCGGAACGTGCGCAACTCCCAGAGCGTGGCGTTGAAGGTCGTTAGCAAGCGCTCGCTGGAGAAAAACGGTTACGCGGCGCAGGTGGAGCGCGAGGTCGCTATCATGCGCCGGCTGCGCCACCCGCACACGATAAAACTCTACGAGGTCCTCGCCACCAGGACCAAAATCTACTTCGTGGTGGAGTTCGCCGCACACGGCGAACTCTTTCACGTGGTCGCTGGCGAGGGCCGTCTTACGGAGGACCTCAGTCGGAAGTACTTCCGACAGCTCGTGTCCGCCGTGAGACACTGCCACTCGCGCGGCGTCTACCACCGCGACTTGAAGCTCGACAACCTCCTGGTTGACGAGAACATGAACCTCAAGGTCTCCGACTTCGGGTTGGGCGCGTTGAAGAGCCAGATCCGACACGACGGCATGTTGCACACCCTGTGTGGGACCCCTGCTTATGTGGCGCCCGAGATTCTCGCGAGGAAGGGGTACGACGGTGCCAGCGTGGACGTGTGGTCGTGCGGCGTCGTTTTGTTCGCGCTCAACGCTGGGTACTTACCGTTCAATGATTCCAATGTTGCGGTTCTGTATAGGAAGATCTACAGGGGACAGTTTCGGTTCCCGAGGTGGATGTCGAGTGAGCTCAGGAATCTCGTGACGAGGTTGTTGGACACGAATCCCGAGACGAGGATCAGGTTGGATGAGGTCACACGGGACACGTGGTTCAATCGGGGCGGGTATGCGGATAACTTGACCCGACCCGAGGATTGGGGAGACAACCGGGTTGTTGTGACGAAAACGTTGAATGCGTTTGACTTGATATCTTTCTCGCCCGGGGTTGACATTTCGGGTTTGTTTACCGACCCGGATTATTCGGATTCGACGGAGCGGTTCGTTACGACGGAGGTGCCGGAGAGGGTTACGGCGTCGGTGAGGGAGGCGGTGGTGACGGAAAGCGTGACGGTGAAGAAGGATGAGAGTGGGTTCGGTGGAGTGAGGATAGAAGGGTTGGATGGGAGTTTTGTGATTGGGGTTGGATTTTACCGGTTAACGGATGAATTGGTTATAATTGAGGTGAAGAGGAGAGAGAGAAAAGAAGGGAGTGGGGAACGGTTTTGGGGAGATGTGCTGAGGCCAACGCTTCTTGCTTTGGCTCATTACCCGGTCTCTCGGTGA 1320 0.5636 MLDEQNGAVTGTETTKTSSTTKDEEVAGVVLFGKYEIVKLLGVGASAKVYHARNVRNSQSVALKVVSKRSLEKNGYAAQVEREVAIMRRLRHPHTIKLYEVLATRTKIYFVVEFAAHGELFHVVAGEGRLTEDLSRKYFRQLVSAVRHCHSRGVYHRDLKLDNLLVDENMNLKVSDFGLGALKSQIRHDGMLHTLCGTPAYVAPEILARKGYDGASVDVWSCGVVLFALNAGYLPFNDSNVAVLYRKIYRGQFRFPRWMSSELRNLVTRLLDTNPETRIRLDEVTRDTWFNRGGYADNLTRPEDWGDNRVVVTKTLNAFDLISFSPGVDISGLFTDPDYSDSTERFVTTEVPERVTASVREAVVTESVTVKKDESGFGGVRIEGLDGSFVIGVGFYRLTDELVIIEVKRRERKEGSGERFWGDVLRPTLLALAHYPVSR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01731 439 MobiDBLite consensus disorder prediction 1 20 - -
Pumo7g01731 439 CDD CIPK_C 317 429 - -
Pumo7g01731 439 FunFam Aurora kinase A 29 118 - -
Pumo7g01731 439 Gene3D Transferase(Phosphotransferase) domain 1 29 314 - -
Pumo7g01731 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 29 371 - -
Pumo7g01731 439 ProSiteProfiles Protein kinase domain profile. 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01731 439 SMART serkin_6 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01731 439 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01731 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pumo7g01731 439 Gene3D Kinase associated domain 1, KA1 315 434 - -
Pumo7g01731 439 Pfam NAF domain 314 372 IPR004041 GO:0007165
Pumo7g01731 439 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Pumo7g01731 439 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pumo7g01731 439 FunFam Maternal embryonic leucine zipper kinase 28 312 - -
Pumo7g01731 439 SUPERFAMILY Protein kinase-like (PK-like) 31 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01731 Pumo-Chr7 45671808 45673545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01731 30 430 CBL-interacting serine-threonine protein kinases AT2G30360 54.300 1.50e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo7g01731 Pkinase 9.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01731 - K12761 gmx:100788245 511.916