Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01712 ATGGCTGGAACTTCTCAACAAAGGGTGATTTTTCCTCACTTCAATCTCAAAATCTGTTTGTTCTTATGTCTTATTGGGATAGTTTCAGCTACAGATTTAACTTCTTCAGCAACTGTTTCTGTGAGTTCAGCTGATTATGAGTTAAGCACCATTTTTTATGCTTTGAATTCGAAGTGTCCTCTGGGCCTTGCTACCATTAAGACACTAGTTACCGCTGCTGTGTGGAAAGAGCCTCGCATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCGGTTTTGTTAAAGGACACTCCAACTTTCACTGGCGAACAAGGTGCCCTCCCCAACGCTAATTCTCTAAGGGGTTTCGAAGTCATAGAGAACATAAAAGCAAAACTAGAGATTTTGTGCCCTGGGGTTTTCTCTTGTGCTGACATCCTAACCGTTGCTGCAAGGGATTCTGTTGTTGCCCTCGGTGGACCTACTTGGAATGTTCTCTTGGGTAGAAAAGACTCAACAACTGCCAATCTAAGTGCTGTTTTAACAGATTTTCCCACTCCCTTTATGAATCTTACTGAACTTCATGCTACGTTCGGGAAAAAGAATTTCACAGCCCAAGAAATGGTTGCTTTTACAGGTTAA 648 0.4259 MAGTSQQRVIFPHFNLKICLFLCLIGIVSATDLTSSATVSVSSADYELSTIFYALNSKCPLGLATIKTLVTAAVWKEPRMGASLLRLHFHDCFVQGCDASVLLKDTPTFTGEQGALPNANSLRGFEVIENIKAKLEILCPGVFSCADILTVAARDSVVALGGPTWNVLLGRKDSTTANLSAVLTDFPTPFMNLTELHATFGKKNFTAQEMVAFTG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01712 215 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Plant peroxidase signature 208 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 SUPERFAMILY Heme-dependent peroxidases 56 215 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 FunFam Peroxidase 52 197 - -
Pumo7g01712 215 Gene3D Peroxidase, domain 2 187 215 - -
Pumo7g01712 215 PANTHER PEROXIDASE 72-RELATED 47 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 ProSiteProfiles Plant heme peroxidase family profile. 47 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 PRINTS Haem peroxidase superfamily signature 209 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 Gene3D - 56 186 - -
Pumo7g01712 215 Pfam Peroxidase 69 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo7g01712 215 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01712 Pumo-Chr7 45170671 45196917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01712 45 215 Peroxidase AT5G05340 54.971 5.87e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01712 K00430 - gmx:100811432 284.648