Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01707 ATGGAGAGCATCGCAACTGATTTGACAAAGTCAATTTTGGAGAAATTGATGAATGCAACAATAGAACAATCACGTTATATTTGTTGCTTCTCATGCATTACTGAGGACTTTGAAAAGGAAAAGGAAACTTTGAAAGCAAAAAGGTCAACTGTGGAGAAAAAGGTTAAAGTAGCAAACAAAAGGGTTGAAGATGTTCTACCTGAAGTTACATTTTGGCAAGAGCAAGCTGATAAGCTTATTCAAGAGGACACCAAAACAAGAATGACATGCTTTTTTGGGTGGTGTCCTAATTGCAAATGGCTATATAGAAGGGGAAAGGAACTGGCAAATAAGACTCAAGAGATGAAAACACTCATCATGGAAGAAAGTAAATTCGAAAGTGTTGGAATCCCTCGTGATCTTCCAGATGTTGAATATTATTCTTCTCAACATTACATTTCTTTCAAAAGTAGAGAGTTTAAATACAAAGAACTTTTGGAAGCACTGGCAGATGACAACAACTATATGACAGGATTGCAATGGATGGGGGGCACAGGTAAAACAACATTAGCAAAAGAAGTGGGTAAGGAGCTTAAGAAATCAAAAAAGTTTGATCAGGTCGTTGATACTACGGTATCTTGTACTCCTGATATAAAAAAGATTCAAGATGATATTGCAGGACCATTAGGATTGTCATGGGACAATTGTACTGAATCAGAGAGGCACAAAAAATTGAGAAGTAGATTGATGACCAATGGTGAAAAAATTCTTATAATACTTGATGATGTATGGGGAGATATCAATTTTGAAGAAATAGGTATTCCAAAAAAGGACAATCAAAGAGGTTGCAGAATTCTTGTAACCACCCGTAATCTAAGGATATGCAACTCAATGGGATGTGACAAAAAAATTCAACTTGAGCTCTTACCTAAGGAAGATGCATGGATGTTGTTCAAAAAGCATGCTGGTTTAAGTGATAGTTCTCCTAAAAGTATTTTAGATACGAGTCATAAAATTGCTAAAGAATGCAAAGGATTACCAATTGCAATTGCAGTTATCGCTGGCAGTTTAAAGGGTGAACAACGCCAAGAAGAATGGAATGTTGCCTTAAAATCCTTGCAAAAGTCCGTGCCCCAGCATGTCGATGATGGAACTTTGGGTGAAATTTATAAATGTTTGAGGTATAGCTATGACAATATGAAGAATAAAACAACTAAGGAATTGTTCCTTTTATGCTCTGTGTTTCGAGAAGATGAAGAAATTCCTATTGAAATTTTAACCAGAATTTCCATAGGAGCCGGCCTTGTTGGGGAAATTGATGATAAATATGATGCATATCGAAATGAAGTGCTTGTAGCAAAAAATAAACTCATAGATTCATGTTTATTGCTGAAGACTGACGAAGGAAGTGTTGAAATGCATGACTTGGTTCGTGAAGTGGCCTTATGGATAGCTAATGAAGAGATTCAAGCAGTGAATACATCTAACAAAAATCAAAAGCCATTGGTTGAAGGGGCGAAGAATCTTAAATATTTGTTGTGTGAAGGCAAGGGCATGGATGTGTTTTCCTTCAGGTTTGATGGATCGAAACTTGAGATTCTAATTGTCTACTTGGAAAAAGACGAAAATGATTCTGTGGAAGTCTCAAATTCATTCTTCGAAAACATGAAAGGGCTTCGAGTTTTGTATTTATCACACCAAGCCTGGAAGGATCCAACTTTATCATTACCACAGTCAATTCAATCATTGACCAATATTCGATCTTTGTACCTTGAAAGTTTCCTCTTAGGTGACATCACTATTCTTGGAAACCTACGATGCCTTGAGACCCTTGATTTGGTTTCATGTTCAATGGATAAGTTGCCATGTGAGATTGCAAAAGTGGAGAAACTTAAATTGTTGAACTTGTATTGTTGTGAATTTAGAAGCGATAATCCATTTAAAGTGATTGAAAATTGCTCTTCATTGGAGGAATTGTATTTCATTAGAAGTAGTTTTCCGATGGATAGTTTAACAATGCACAAAAAAGTAACGCTTCCTAAATTACAAAGGTTTCAAATAATGGATGAATATGTGGAAGATCAATCAGGAAGGAATTCTTTGATTATTTCAGAGGTTGAAGATTTTTTCTCCGAAGTGACATTGAAGCATCTATTGCAAAAAGCAGAGTTTCTTCTTCTTTTGGAACTTCATGGGAGAAGGAGAAATCTTACACCGGAGATGATTCTGCCTGAAGATGAAGGTACACTTAATCTAGTTGAGCTTCGTTTGGCATTTATTTCACAACCACAGTGCCTTATTGACACTGAGCATATTAATTCTTATGCACAAAATGTCTTCTCTAAGTTGGTTGTACTTATACTTCATGAAATGGAAAATTTGAAAGAACTATGCAGTGGTCCCCTTCCTTTCGAACTTCTGAAATGTTTGGAGAAGTTGGAGATATCTGAATGTATACATTTACAAGGCATATTGTTTAAGAGCAAGCTAACCCTCTGCAATCTTAAGTCGTTGCTTTTGGAAGGTTGCCCAATGTTAACATCTTTGTTTCAAATGTCGACTGCACAAAGCCTAGTGATGTTGGAGCGTTTGTTCATATGGAATTGTGCACAACTTAAAAGTATAATACAAGATGAAACAACAGGGGAGGATTTAGGACAAGAAATAGTTGATGGTGATAATGATAACAAGACTGGTGGTTCTATGTTTCCAAAATTAAAAATTCTTGAAATCAGGAACTGTCCCCTGTTAGATTATATACTTCCAGTGGTGGCTGCTCGAGGTATTCCAAAACTGGAAGAAATCATAATAGATGGTTGTCTTGAGTTCAAATACATATTTGGCCCAAACCAACATAAACATGAAGAGCAAGATTTGCAAATAGTTGATGGTGATAATGATAACAAGACTGGTGGTTCTATGTTTCCAAAATTAAAAATTCTTCAAATCAGGGACTGTCCCCTGTTAGATTATATACTTCCAGTGGTGGCTGCTCGAGGTATTCCAAAACTGGAAGAAATCATAATAGATGGTTGTCTTGAGTTAAAATACATATTTGGCCCAAACCAACATAAACATGAAGAGCAAGATTTGCATCAAGAGTTGAAGGAAGTCATGTTTGTTACATTAAAAAGAATGACTCTAAAAGGCTTGCCAAATTTTGTTGACATTTTTCCAGAATGTGATCAATCCATGTGTTTATCTATAAAGAGGTCATGTTCCAAAGATGGCTCCGAGACACAAAAAGAATTAGATCCCATCAAATGTAATATTTTCCCTTGGAGCCGTAAATATAGACACAAATTGAGAACTACAAAAATCCCTTTGGATTCCAAGGATCAATTGCAAGATTGCTCTCTCTCACCGGTAGTTGACTCTAAAGTCAATGATCTAATTGGACAAGAAATGATTTGTTCCGACCTCAAGTCCATACGTATCATTAGGATCATCATTTTTGAGGTATTGTCCGCTTAG 3453 0.3608 MESIATDLTKSILEKLMNATIEQSRYICCFSCITEDFEKEKETLKAKRSTVEKKVKVANKRVEDVLPEVTFWQEQADKLIQEDTKTRMTCFFGWCPNCKWLYRRGKELANKTQEMKTLIMEESKFESVGIPRDLPDVEYYSSQHYISFKSREFKYKELLEALADDNNYMTGLQWMGGTGKTTLAKEVGKELKKSKKFDQVVDTTVSCTPDIKKIQDDIAGPLGLSWDNCTESERHKKLRSRLMTNGEKILIILDDVWGDINFEEIGIPKKDNQRGCRILVTTRNLRICNSMGCDKKIQLELLPKEDAWMLFKKHAGLSDSSPKSILDTSHKIAKECKGLPIAIAVIAGSLKGEQRQEEWNVALKSLQKSVPQHVDDGTLGEIYKCLRYSYDNMKNKTTKELFLLCSVFREDEEIPIEILTRISIGAGLVGEIDDKYDAYRNEVLVAKNKLIDSCLLLKTDEGSVEMHDLVREVALWIANEEIQAVNTSNKNQKPLVEGAKNLKYLLCEGKGMDVFSFRFDGSKLEILIVYLEKDENDSVEVSNSFFENMKGLRVLYLSHQAWKDPTLSLPQSIQSLTNIRSLYLESFLLGDITILGNLRCLETLDLVSCSMDKLPCEIAKVEKLKLLNLYCCEFRSDNPFKVIENCSSLEELYFIRSSFPMDSLTMHKKVTLPKLQRFQIMDEYVEDQSGRNSLIISEVEDFFSEVTLKHLLQKAEFLLLLELHGRRRNLTPEMILPEDEGTLNLVELRLAFISQPQCLIDTEHINSYAQNVFSKLVVLILHEMENLKELCSGPLPFELLKCLEKLEISECIHLQGILFKSKLTLCNLKSLLLEGCPMLTSLFQMSTAQSLVMLERLFIWNCAQLKSIIQDETTGEDLGQEIVDGDNDNKTGGSMFPKLKILEIRNCPLLDYILPVVAARGIPKLEEIIIDGCLEFKYIFGPNQHKHEEQDLQIVDGDNDNKTGGSMFPKLKILQIRDCPLLDYILPVVAARGIPKLEEIIIDGCLELKYIFGPNQHKHEEQDLHQELKEVMFVTLKRMTLKGLPNFVDIFPECDQSMCLSIKRSCSKDGSETQKELDPIKCNIFPWSRKYRHKLRTTKIPLDSKDQLQDCSLSPVVDSKVNDLIGQEMICSDLKSIRIIRIIIFEVLSA 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01707 1150 Gene3D Ribonuclease Inhibitor 488 879 IPR032675 -
Pumo7g01707 1150 FunFam Probable disease resistance protein At1g61300 133 296 - -
Pumo7g01707 1150 Coils Coil 34 61 - -
Pumo7g01707 1150 Gene3D - 135 298 IPR027417 -
Pumo7g01707 1150 Gene3D - 302 389 IPR042197 -
Pumo7g01707 1150 Gene3D Ribonuclease Inhibitor 880 1032 IPR032675 -
Pumo7g01707 1150 PRINTS Disease resistance protein signature 596 612 - -
Pumo7g01707 1150 PRINTS Disease resistance protein signature 243 257 - -
Pumo7g01707 1150 PRINTS Disease resistance protein signature 336 350 - -
Pumo7g01707 1150 PRINTS Disease resistance protein signature 169 184 - -
Pumo7g01707 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Pumo7g01707 1150 Gene3D - 390 475 IPR036388 -
Pumo7g01707 1150 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 940 - -
Pumo7g01707 1150 SUPERFAMILY L domain-like 466 1011 - -
Pumo7g01707 1150 Pfam NB-ARC domain 157 392 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01707 Pumo-Chr7 45123201 45133214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01707 170 589 WRKY Transcription Factor Family AT5G45050 24.324 2.99e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01707 - - var:108346730 1100.89