Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01705 ATGGATTCTAGTAGGCGGCGTAGTAAAAAAGCAGCTATGCAACGCAAGTTGCAACAACTTCAATCGGTTACAAATTCCAGTGCTGTGAACAAAGCCTCAATTATTGTGGATGCCACCAGATACATAGAGGAGCTGAAGCAAAAAGTGGATGGATTGAACTCAGAGCTTGGAACCGCTGAGTCATCAATCTCCCAGGACGAACTACCCATGGTCACCGTAGAAATCCTAGAAAGGGGTTTCCTCATTAATGTGTTCTCAGAAAGGAATTGCCCCGGCATGCTTGTGGCAATACTCGACGCCTTCGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACCTTCCAGCTTGAAGCCGTTGGAGGAGAAGTAAGACAATTAATAAGCTATGATATACATGATTTAATTCCTTTTTATCTTAATATATATTTGTTCTTCTTTTGTTTATCGTTGGAATACTTTTAA 477 0.4151 MDSSRRRSKKAAMQRKLQQLQSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAESSISQDELPMVTVEILERGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGEVRQLISYDIHDLIPFYLNIYLFFFCLSLEYF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01705 158 Coils Coil 35 62 - -
Pumo7g01705 158 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 63 IPR036638 GO:0046983
Pumo7g01705 158 Gene3D - 4 68 IPR036638 GO:0046983
Pumo7g01705 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01705 Pumo-Chr7 45085703 45087992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01705 7 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 27.465 4.03e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01705 - - gmx:100499821 233.417