Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01684 ATGTCTTTCAGTTTCACTGACCTTCTTTCCACCAACAATAACATGGCCATGGATGATGATCCTTTTGGACTTGAATTTGCTAATAACTTCAAGTCAGCTTCACCGCCTCTCTCTCCTCCATCATCATTCTACCCTTCTTATGCTGAGTTCCCACCTGGTTTTGCCCCAATCACACAGTCATTGAATTCACCCCTCTTTTTTTCTTCTCAAAATGTTCCTGCATCTTACACAACTGAGCCATCTTCTAGCATGAGCTTCAACATGAGAAACAGTTCAACTGAGGGTCAACAAGGTAACAAGGAGCAAGAGAGAAACTACTCTGACCTCTCCTTCCAAACAAAAACAAGCCACGTGCCTCTCTTTCAACCTTCCACAAACATGTTTCAAGTGCAGGAGCCACTAAAGAAACAGGACACAATGACATTCAATGAAGCTGCAAATAAAACAAATTTCTCATCTGAGAGGACAGAAACAAAATCTGAATATCCATCCACTCAGGGCTTCTCAACAGCATTGGCCTCAATCAAACCTGAAATACAAAGCAATTCTGTTCCTGGATCTGTTCAATTTAACTCCACTAATGCTCCTAAGTCTATTAGAGAACAAAGGAAATCAGAAGATGGTTACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGCGAAAATCCGCGCAGTTATTACAAGTGCACGCACCCGAATTGCCCAACAAAGAAGAAAGTTGAGAGGTCTGTGGAGGGATATATTACTGAAATAATATACAAGGGAAGTCACAATCATCCCAAGCCACATGGTAGAAAAAATGGTTCTCAATCAATTCATCAAACTTCTTCATCCTGCACAAACTCGGGGATTTCTGATCAATCTGCGGGAGAGGAAGATCTTGAGCAAACATCACAGACTAGTTATTCTGGAGGGGGTGTTGATGACCTTGGACCTGAGGCCAAAAGATGGAAGAGGGAGAATGAAAATGATGGCCATTCCTATTCCTCTGCTGTGAGTAGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAACCCAAACCCAAGGAGTTACTACAAATGCGTAGCCCCGGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGACATGAAAGCTGTGATTACAACCTATGAAGGGAAACATAACCATGATGTACCTATAGGACGAGGAAACTCAAGCTATAACATGAACAGAACTTCTCTAAACAACACAACCAACAACACCAACACCAGCAATGTAACAGCTCCTGCCCCTATAAGGCCCTCAGCAGTGACTAACTATTCTAACTCAACAAGTTTCACCAATTCACTTCATGACACAAAGCCACCAACATCTGCAAGTCAAGAACCTTTTCCAATGGACTTGTTGCTGAGCCCTGGAAGCCTTGGATTTTCGGCTAATGACTCATTCCTTCAGTCCTTTTTGTCAAAGAACTTTTGA 1524 0.4193 MSFSFTDLLSTNNNMAMDDDPFGLEFANNFKSASPPLSPPSSFYPSYAEFPPGFAPITQSLNSPLFFSSQNVPASYTTEPSSSMSFNMRNSSTEGQQGNKEQERNYSDLSFQTKTSHVPLFQPSTNMFQVQEPLKKQDTMTFNEAANKTNFSSERTETKSEYPSTQGFSTALASIKPEIQSNSVPGSVQFNSTNAPKSIREQRKSEDGYNWRKYGEKQVKGSENPRSYYKCTHPNCPTKKKVERSVEGYITEIIYKGSHNHPKPHGRKNGSQSIHQTSSSCTNSGISDQSAGEEDLEQTSQTSYSGGGVDDLGPEAKRWKRENENDGHSYSSAVSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVAPGCSVRKHVERAAHDMKAVITTYEGKHNHDVPIGRGNSSYNMNRTSLNNTTNNTNTSNVTAPAPIRPSAVTNYSNSTSFTNSLHDTKPPTSASQEPFPMDLLLSPGSLGFSANDSFLQSFLSKNF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01684 507 FunFam WRKY transcription factor 193 265 - -
Pumo7g01684 507 SUPERFAMILY WRKY DNA-binding domain 346 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 ProSiteProfiles WRKY domain profile. 206 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 436 IPR044810 GO:0003700
Pumo7g01684 507 MobiDBLite consensus disorder prediction 269 307 - -
Pumo7g01684 507 MobiDBLite consensus disorder prediction 181 227 - -
Pumo7g01684 507 ProSiteProfiles WRKY domain profile. 349 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 SUPERFAMILY WRKY DNA-binding domain 202 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 Gene3D WRKY domain 341 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 MobiDBLite consensus disorder prediction 181 198 - -
Pumo7g01684 507 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 Pfam WRKY DNA -binding domain 355 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 Gene3D WRKY domain 191 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 SMART WRKY_cls 354 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 SMART WRKY_cls 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g01684 507 MobiDBLite consensus disorder prediction 458 475 - -
Pumo7g01684 507 FunFam WRKY transcription factor 33 341 407 - -
Pumo7g01684 507 MobiDBLite consensus disorder prediction 199 220 - -
Pumo7g01684 507 MobiDBLite consensus disorder prediction 256 315 - -
Pumo7g01684 507 MobiDBLite consensus disorder prediction 77 104 - -
Pumo7g01684 507 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01684 Pumo-Chr7 44712616 44715896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01684 200 484 WRKY Transcription Factor Family AT2G38470 53.774 5.17e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g01684 WRKY 4.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01684 K13424 - gmx:100127367 872.463