Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01679 ATGGGAGGGTGTTGCAGCTGCCATGTATCATTTGTAGGCAAGGTGCATGATGTGGAATGTGAATGTAACCATGATGATGGTACATGTGAACATGGTGGGGCACGGGTCATGTTAAATGGGTCCTCTACGTTTGTGTCAATGCACAGCCAAAAGGGTTCAAAAGGAGTTAATCAAGATGCATTAACAGTTTGGGAGGACTTCACTGGGCAAAAGGACATGATCTTTTGTGGCGTGTTTGATGGTCATGGTCCTCTAGGACACAAGATAGCACAGTGCATACGTGACAATCTACCCTCAAAACTCTCGGCATCAATCAAACAGTCACAAAAAAAGGCTATGAAACACTGTGATACTAATGCTGCAGATGGAAGCAGTCATAGTGATGTCTATGTTCAAGATAACCAAAACATGTCCTTTCCTTCTTGGGAGGAAACCTTTATGAGGTGCTTCAGTGAAATAGATGAAAAACTTGCTAAGAAAATTGACACTGATGGATTTCGTGGTGGTAGCACCGCTGTAACTTTGATCAAACAGGGTGACCAATTAATAATTGGCAATGTGGGGGATTCTCGTGCAGTTCTTTGCAGAAGAGCACATGACAACAATCTTATTCCTGTTCAACTTACTGTTGACTTGACCCCAGATATTCCAAGTGAAGCTTTGAGAATCATTAATTGTGGAGGTAGAATTTTTGCTGCACAAGAAGATCCAAGTGTAAACAGAGTATGGATGGCTAATGGGGACTCCCCTGGACTGGCTATGGCAAGAGCCTTTGGAAATTTTTGCCTAAAAGACTGTGGTGTCACCTCAGTCCCTGATGTATCTTACAGAAAACTTACCAAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGATATGGGATGTGCTAACAAACAGTGAAGTGATAAACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCAGCCAAATTGTTAGTAAATCACGCTGTTCGGGCGTGGAGATATAAGTATGGTTTCAAGGTTGATGATTGTACAGCCATATGCTTGTTCCTGAAGGATTAG 1044 0.4262 MGGCCSCHVSFVGKVHDVECECNHDDGTCEHGGARVMLNGSSTFVSMHSQKGSKGVNQDALTVWEDFTGQKDMIFCGVFDGHGPLGHKIAQCIRDNLPSKLSASIKQSQKKAMKHCDTNAADGSSHSDVYVQDNQNMSFPSWEETFMRCFSEIDEKLAKKIDTDGFRGGSTAVTLIKQGDQLIIGNVGDSRAVLCRRAHDNNLIPVQLTVDLTPDIPSEALRIINCGGRIFAAQEDPSVNRVWMANGDSPGLAMARAFGNFCLKDCGVTSVPDVSYRKLTKQDEFVVLASDGIWDVLTNSEVINIVASAPKRSMAAKLLVNHAVRAWRYKYGFKVDDCTAICLFLKD 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01679 347 Pfam Protein phosphatase 2C 69 325 IPR001932 -
Pumo7g01679 347 SMART PP2C_4 34 343 IPR001932 -
Pumo7g01679 347 ProSiteProfiles PPM-type phosphatase domain profile. 44 345 IPR001932 -
Pumo7g01679 347 Gene3D - 37 347 IPR036457 -
Pumo7g01679 347 PANTHER PROTEIN PHOSPHATASE 44 343 IPR015655 GO:0004722|GO:0006470
Pumo7g01679 347 SUPERFAMILY PP2C-like 39 346 IPR036457 -
Pumo7g01679 347 CDD PP2Cc 44 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01679 Pumo-Chr7 44589178 44592900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01679 35 347 PP2C-type Phosphatase Gene Family AT1G16220 47.840 2.60e-109 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01679 - - vra:106755106 551.206