Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01656 ATGACACTTTCTTCGTTTCTTTTTCCGGTTCTTCTCATATTTAACTTCTTCTTCACACCCTCACTGTCTCTGTCCTCCGACGGGCTTGCTCTTTTGGCACTGAAATCCGCCGTGGACGAGCCTTCTGCCGCGTTCTCCGACTGGAACAACGGCGATCCCACTCCGTGCGCCTGGTCGGGGATCGCCTGCGCCAACATCTCCGGCGAGGCGGAGTCCCGAGTGGTCGGAATCTCCCTCGCCGGAAAATCGCTCTCCGGCTACCTCCCCTCGGAGCTCGGCACTCTGCGCTTCCTCCGGCGGCTCAACCTCCACGACAACGCCTTCTCCGGCGTGCTCCCGGCGCAGCTCTCCAACGCCACCGCGCTCCACAGCCTCTTCCTCCACGGGAACAACCTCTCCGGCGCGATCCCCTCCTCCCTCTGCACCCTCCCCCGCCTCCAGAACCTCGACCTCTCCGAAAACTCCTTCTCCGGCCACATCCCCGACCACCTCCAAAACTGCAAGAACCTCCAGCGCCTCATCCTCGCCGGCAACAAATTCTCCGGCGAGATTCCCGCCGGCGTGTGGCCGGAGATGCCAAACCTCCTCCAACTCGACCTCTCCGATAACGAGTTAACCGGCTCAATCCCCGACGAAATCGGAACCCTAATTTCCCTCTCCAGCACGCTGAACCTCTCCTTCAACCACCTCTCGGGTAAAATTCCGGCGTCGTTAGGAAAGTTACCGGCAACAGTGAACTTTGACCTCAAAAACAATAGCCTCAGCGGCGAAATTCCCCAGACGGGGTCGTTTTCGAACCAGGGCCCCACTGCGTTCCTCGGAAACCCGGACCTATGCGGGTTTCCGCTTAAGAAATCGTGTTCTGGTTCGAATCGGGATTTTTCGCCCGGCTCGGACCAGAACAAACTAGGTAACCGGTCCAAGGGGTTGAGCCCGGGGTTAATTATTTTAATCTCGGTGGCTGATGCTGCTGTAGTGGCCTTCATTGGGGTTGTGATTGTTTACATTTATTGGAAGAGAAAGGATGATGAGAATGCTTGTAGTTGCATTAGGAAGAGGAGTTTTGGTGAAGAGAAAGGGAGTGTGTGTGTGTGTGGTGGGTTATCATGTATGAATGGGGTGAAGAGTGATGATGATGATGAGGAGGAGGAGGAGTATGAGGGGGGTGAGGGTGAGGGTGAAGGGGAATTGGTGAGGATTGATAAGGGTTTGAGTTTTGAGCTTGATGAGTTGTTGAGGGCTTCAGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGAGTTTGCTGCAGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTGAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGGCTCATGCCCTTAGAGGGAGAAATGGCCAACCATCCACAAACCTTTCATGGTCCACCAGACTGAGAATCGCCAAAGGAACAGCCAGGGGCCTGGCCTATCTCCACGAATGCAGTCCAAGAAAATTCGTCCATGGCGACTTCAAGCCCTCCAACATCCTTCTTGACAACAACTTCCAGCCCTACATATCCGACTTCGGCCTTAACCGTCTCATCAGCATCACCGGCAACAACCCCTCCACCGGCGGATTCATGGGAGGAGCTCTCCCTTACATGAACTCATCACAGAAGGAGAGAACCAACAGTTACAAGGCCCCCGAGGCTCGTGTTCCTGGCGGCCGGCCCACGCAGAAATGGGACGTGTACTCATTCGGGGTTGTGCTGCTCGAAATACTAACTGGGAGGTCACCAGAATCTTCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTGGTGAAGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTGTCGGAAATGGTTGATCCGTCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCATGTTGCACTGGCTTGCACTGAGGGAGACCCTGAGGCTCGGCCTAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGATCATAA 2064 0.5407 MTLSSFLFPVLLIFNFFFTPSLSLSSDGLALLALKSAVDEPSAAFSDWNNGDPTPCAWSGIACANISGEAESRVVGISLAGKSLSGYLPSELGTLRFLRRLNLHDNAFSGVLPAQLSNATALHSLFLHGNNLSGAIPSSLCTLPRLQNLDLSENSFSGHIPDHLQNCKNLQRLILAGNKFSGEIPAGVWPEMPNLLQLDLSDNELTGSIPDEIGTLISLSSTLNLSFNHLSGKIPASLGKLPATVNFDLKNNSLSGEIPQTGSFSNQGPTAFLGNPDLCGFPLKKSCSGSNRDFSPGSDQNKLGNRSKGLSPGLIILISVADAAVVAFIGVVIVYIYWKRKDDENACSCIRKRSFGEEKGSVCVCGGLSCMNGVKSDDDDEEEEEYEGGEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLAHALRGRNGQPSTNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDFKPSNILLDNNFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMNSSQKERTNSYKAPEARVPGGRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVKWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPEARPRMKTVSENLDKIGS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01656 687 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Pumo7g01656 687 Gene3D Phosphorylase Kinase; domain 1 419 466 - -
Pumo7g01656 687 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Pumo7g01656 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Pumo7g01656 687 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Pumo7g01656 687 Pfam Protein kinase domain 429 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01656 687 SUPERFAMILY L domain-like 24 283 - -
Pumo7g01656 687 SMART LRR_typ_2 143 166 IPR003591 -
Pumo7g01656 687 SMART LRR_typ_2 95 118 IPR003591 -
Pumo7g01656 687 SMART LRR_typ_2 192 216 IPR003591 -
Pumo7g01656 687 Gene3D Transferase(Phosphotransferase) domain 1 467 687 - -
Pumo7g01656 687 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 190 - -
Pumo7g01656 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 164 685 IPR046959 -
Pumo7g01656 687 SUPERFAMILY Protein kinase-like (PK-like) 418 681 IPR011009 -
Pumo7g01656 687 ProSiteProfiles Protein kinase domain profile. 386 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01656 687 Pfam DNA binding protein S1FA 306 340 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pumo7g01656 687 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Pumo7g01656 687 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Pumo7g01656 687 FunFam Os07g0541700 protein 468 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01656 Pumo-Chr7 43338491 43344094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01656 19 685 Receptor kinase-like Gene Family AT1G67510 65.444 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo7g01656 Pkinase 8.4e-28 CL0016
TF S1Fa-like Pumo7g01656 Pkinase 8.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01656 - - gmx:100793996 1190.64