Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01642 ATGGCAAAACCTATATCTAAAACGGGTTCGCGTAAAAATGTACGTATTGGTCCGCGTAAGCATACTCGTAAAATACCAAAGGGAGTTATTCATGTTCAAGCTAGTTTCAACAATACTATTGTGACTGTTACAGATGTACGAGGTCGGGTGATTGCTTGGTCCTCCGTCGGTACTTGTGGATTCAAGGGTACACGAAGGGGGACACCTTTTGCCGCTCAAACTGCAGTAAGAAATGCTATTCGAACAGTATCGGATCAAGGCATGCAACGAGCAGAAGTCATGATAAAAGGTCCTGGTCTCGGAAGAGATGCGGCATTAAGAGCTATTCATAGAAGTGGTATACTATTAAATTTTATATGA 360 0.4222 MAKPISKTGSRKNVRIGPRKHTRKIPKGVIHVQASFNNTIVTVTDVRGRVIAWSSVGTCGFKGTRRGTPFAAQTAVRNAIRTVSDQGMQRAEVMIKGPGLGRDAALRAIHRSGILLNFI 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01642 119 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 13 117 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo7g01642 119 SUPERFAMILY Translational machinery components 23 119 - -
Pumo7g01642 119 MobiDBLite consensus disorder prediction 1 23 - -
Pumo7g01642 119 Hamap 30S ribosomal protein S11 [rpsK]. 3 119 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo7g01642 119 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 119 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo7g01642 119 Pfam Ribosomal protein S11 28 119 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo7g01642 119 Gene3D Ribosomal protein S11 8 119 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01642 Pumo-Chr7 43142303 43142662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01642 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 33.333 8.58e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01642 K02948 - gmx:3989330 222.246