Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01639 ATGATCACAATATATAGTCATTATGGATTTTATGAGCAGGCAATGTATGTGTATCCAGGAAGCCGAGTTCCAGAGTGGTTGGAGTATCAGACAACAAAGGATTATATAATTATTGATCTCCCTTCTACTCTGTGCTGCTCTCAGTTTGGTTTCATTTTTGGCTTGTTTATCTCTAATCGTAATGCAAAGACATTTGAGCATAAATTTTCATTTTATATCACTATCAGTGTTGATGAAGATGAAAGTAAAAAGGATAGTTTCGACATCTACATGAATGGCCCACTTAGCTGGTTTGCATCGGATCATGTGTGTGTGATTTACGACCAACAATGTTCTCACTTTCTAAACAGTAAAGCCAAAAATTTGACAAGGATTAAAATCAAGGTTAAAGCAATGGCAACAGGCGAAGCTGCTAGATTAAACTTAAGAGGGTTTGGGGTTAGACCACAAATATATGGCTTTGTAGATGACAAACTTGAGAAGGGAGAAGAAATATGGCCATCACTTGTTGGAGCAATTCAAGGATCACTGATTTCGTTGACCATATTCTCTGGAAATTACTCCTCTTCACACTGGTGTTTAGAAGAACTTGTGACGATACTTGAGTGCAAGGAGAAATACAGACAAACTGTAATACCTGTTTTCTATGGTGTGAATCCCACAGATGTACGACATCAAAAGGGGAGCTATGGAAAAGCACTTGCTGAACATGAAAAGAAATATACGGTGCAAAACTGGAGACATGCTTTGAAGAAGGCTGCTGATTTATCAGGAATAAAGTCTTTCGATTACAACGAATATCAGATAATGCCTCAAATAAAGTATGATGTTTTTGTTAACTTTAGGGGCAAGGACATTCGTCATGGCTTTCTTAGTTATTTGACTGAGGCCTTTCATCAAAAGCAAATCTATGCCTTTGTAGATGATAAACTTGAGAAGGGAGATGAGATATGGCCATCACTTGTTGGAGCAATTCAAGGATCATTGATTTCTTTGGCCATATTCTCTGGAAACTATTCCTCTTCACGTTGGTGTTTGGAAGAACTTGTGCAAATACTTGAGTGCAGGGAGAAATACAGACAAACTGTAATACCTGTTTTCTATTATGTAAATCCCGCAGATGTACGACATCAAAAGGGGAGTTATGGAACAGCTCTTGCTGAACATGAAAAGAAATATAATTTGACAAACGTGCAAAACTGGAGACATGCTATGAAGAAGGCTGCTGATTTATCAGGAATAAAGACTGAAGCTGAGCTGCGTCAAGAAATTATCAACATTGTTAATCTTGTGCTGATGAGGCTGGGTAAGCATCCAATTAACTTAAAAAGAGTTGTAGGAATTGAAAACACAATTCAATATTTAGAATCATTGTTGCATCAGGGGTCAAAAAATGTCCGTGTTATTGGAATTTGGGGTATGGGTGGTATTGGAAAGACAACCATTGCAGAAGAAATATTTAACAAACTATATTCTGAATATGATAGTTATTGTTTTTTGGCAAATGTAAAGGAAGAAACAAGAAGACATGGAACAATTTCTTTGAAGGAAAAAATGTTTTCTACACTACTTGGAGAAAATGTGAAAATGAACATAGCAAATGGATTACCAAATTATATTAAGAGAAAGATTGATCGTATGAAGGTATTAATTGTTCTGGATGATGTGAATGATTCAGATCTACTAGAAAAATTATTTGGAAACCATGCTTGGTTTGGACCAGGTAGTAGAATCATTATAACAAGTAGAGACAAGCAAGTTCTTATCGCTAATAATGTTGATGATATATACCAAGTTGGGGCATTGAACTCGGGTGAAGCACTTGAGCTTTTTGGTTTGTATGCCTTTAACCAAAATCATTTTGATATGGAGTATTATAAGCTATCAAAGAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGGAAAGATAAGGATGTATGGGAAAGTCAGCTTGACAAACTCAAACACATGCCAAATACAGATGTTTACAATGCAATGAGATTGAGTTATGATGATCTAGACAACAAAGAACAGAAGATTTTTTTAGATCTTGCATGTTTCTTCGATGGATTGAATTTGAAAGTTGACCACATAAATTTTTTATTGAAAGATAGTGAACGAGATAATTCGGTGGTTGTTGGATTAGAAAGGTTGAAAGATAAATCTCTTATAACCATTTCCGAAGATAATGTGGTATGTATGCATGATATAATACAAGAAATGGCTTGGGAGATTGTTCGCCTTGAATCTATCGAAGATCCTGGAAGTCGTAGCCGATTGAGGGATCCTGATGACATTTATGAAATATTAAAAAATAATAAGGAGCTGCCTGACCTTTCAAAAGCCACAAATCTAGAAGTATTGGAGATCAACTTTTGTCCTCAGTTGACCAGTGTGTCTCCATCAATTTTCTCTCTCAACAAGCTCAAGAAATTGAATCTAGGTTCTTGTTCGCTTACCAAAATTAGAAGCGATAATCATTCAAGCTCCCTTAGTTATCTCAGTCTTCCAATGTGCGAAAAGCTGAGGGAATTTTCAGTCACGTCAGAGAATATGATTATCCTAGATTTGTCATCCACTAGTGTTAATGCATTACCCTCATCTTTTGGATGCCAAAGAAAGCTTGAAGCACTAAATCTAAAATACAGCGGCATTGAGAGCTTGCCTTCAAGCTTCAAGAATCTTACAAGACTGCGATATCTGAATTTATACAATTCCATGGAGCTACGTACTCTAGCAGAGCTTCCCCCTTCCATTGAAACTCTATATGCCTCAGATTGCGCATCATTGAAGACTGTATTGTTTCCATCAATTGCTGAACAATTCAAGGAAAATAGAAGATATGTTTGCTTTTGGAATTGCTTGAAATTGGACGAACATTCTCTCAAGGCTATTGGGACTGAAGTTGAGCTGCTTGGAGAAATAATCAACATTGTCAATCTTGTGTTGATGAGGTTGGATAAGAATCCACTTAACTTAAAAGAACTTATAGGAATCGACAGATCAATTCAATATCTAGAATCAATGTTACATCACGAGTCAAAAAATGTCCGTGTTATTGGAATTTGGAGTATGGGCGGTATTGGAAAGACAACCATTGCAGAAGAAATTTTAAACAAACTTTGTTCTAAATATGATGGTTATTGCCTTTTTGTAAATGTAAAGGAAGAAATAAGAAGACATGGAATAATTACCTTGAAGGAAAAATTGCTTTCTACACTACTAGAAGAAAATGTGAAAATGATCACAGCAAATGGATTGTCAAATTATATCAAGAGAAAGATTGGTCTTGAGCTAAGATATCTTGTTTGGAGGCATTACCCTCTGAAATCCTTGCCAGAGAACTTTTCTGCCAAAAACCTTGTTCTATTGGACTTGTCATATAGCCACGTGGAAAAACTTTGGGATGGAGTACAGAATTTGAAGAATTTAAAAGAAGTTAAAGTCTTTGGTTCTAGAAACTTGAAGGAGCTGCCAGACCTTTCAGAAGCCACAAATCTTGAAGTATTGGATATCAGTGCTTGTCTTCAGTTGACTAGTGTGACTCCATCTATTTTTTCTCTCAACAAGCTCAAGATAATGAAGCTAGATTATCGTTCCTTTACCAAAATTATAATCGATAACCATATAAGCTCCCTTAGTTTTTTCACCCTTCAAGGGTCTACAAAACTGAAGCAATTATTTTCAGTGACATCAGAGAATATGATTGATGAACATTTTTCATGCATTTGTTTCAATGCATTACCCATGTCTTTTGTATGTCAAAGCAAGCTCGAAATGTTAAGGTTAACCAAAAGTGACATGGAGAGCTTGCCTTCAAGCTTCAACAATCTTAGAAGACAGCGATATCTGAGAGTTATAGACCCGAGGGAGCTTCTTATGATAGAGCGTGGTACTGTAGATGTCATAGATTGCAAATCATTGAAGGATGTATTGGCTCCATCAATTTCTGAAGAATTCAAGGATAATAGAAGTTACTTTGGCATTTGGAATTACCAAGGATTTGGTGGAGTATCAGTGGTGGTGGCATTAGATGCAATTTCATCAAGTGTTGAAACTGTGGTCGACCACTCGGAGTTTATAGACGACAAGATATTTGTAAACCTTCATAAAAGAAAAGTTGAAGCCATAAAAGAAAATTGA 4176 0.3616 MITIYSHYGFYEQAMYVYPGSRVPEWLEYQTTKDYIIIDLPSTLCCSQFGFIFGLFISNRNAKTFEHKFSFYITISVDEDESKKDSFDIYMNGPLSWFASDHVCVIYDQQCSHFLNSKAKNLTRIKIKVKAMATGEAARLNLRGFGVRPQIYGFVDDKLEKGEEIWPSLVGAIQGSLISLTIFSGNYSSSHWCLEELVTILECKEKYRQTVIPVFYGVNPTDVRHQKGSYGKALAEHEKKYTVQNWRHALKKAADLSGIKSFDYNEYQIMPQIKYDVFVNFRGKDIRHGFLSYLTEAFHQKQIYAFVDDKLEKGDEIWPSLVGAIQGSLISLAIFSGNYSSSRWCLEELVQILECREKYRQTVIPVFYYVNPADVRHQKGSYGTALAEHEKKYNLTNVQNWRHAMKKAADLSGIKTEAELRQEIINIVNLVLMRLGKHPINLKRVVGIENTIQYLESLLHQGSKNVRVIGIWGMGGIGKTTIAEEIFNKLYSEYDSYCFLANVKEETRRHGTISLKEKMFSTLLGENVKMNIANGLPNYIKRKIDRMKVLIVLDDVNDSDLLEKLFGNHAWFGPGSRIIITSRDKQVLIANNVDDIYQVGALNSGEALELFGLYAFNQNHFDMEYYKLSKRVVNYAKGIPLVLKVLGHLLCGKDKDVWESQLDKLKHMPNTDVYNAMRLSYDDLDNKEQKIFLDLACFFDGLNLKVDHINFLLKDSERDNSVVVGLERLKDKSLITISEDNVVCMHDIIQEMAWEIVRLESIEDPGSRSRLRDPDDIYEILKNNKELPDLSKATNLEVLEINFCPQLTSVSPSIFSLNKLKKLNLGSCSLTKIRSDNHSSSLSYLSLPMCEKLREFSVTSENMIILDLSSTSVNALPSSFGCQRKLEALNLKYSGIESLPSSFKNLTRLRYLNLYNSMELRTLAELPPSIETLYASDCASLKTVLFPSIAEQFKENRRYVCFWNCLKLDEHSLKAIGTEVELLGEIINIVNLVLMRLDKNPLNLKELIGIDRSIQYLESMLHHESKNVRVIGIWSMGGIGKTTIAEEILNKLCSKYDGYCLFVNVKEEIRRHGIITLKEKLLSTLLEENVKMITANGLSNYIKRKIGLELRYLVWRHYPLKSLPENFSAKNLVLLDLSYSHVEKLWDGVQNLKNLKEVKVFGSRNLKELPDLSEATNLEVLDISACLQLTSVTPSIFSLNKLKIMKLDYRSFTKIIIDNHISSLSFFTLQGSTKLKQLFSVTSENMIDEHFSCICFNALPMSFVCQSKLEMLRLTKSDMESLPSSFNNLRRQRYLRVIDPRELLMIERGTVDVIDCKSLKDVLAPSISEEFKDNRSYFGIWNYQGFGGVSVVVALDAISSSVETVVDHSEFIDDKIFVNLHKRKVEAIKEN 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01639 1391 Gene3D - 274 434 IPR035897 -
Pumo7g01639 1391 Gene3D - 141 273 IPR035897 -
Pumo7g01639 1391 Pfam NB-ARC domain 1019 1084 IPR002182 GO:0043531
Pumo7g01639 1391 Pfam NB-ARC domain 456 671 IPR002182 GO:0043531
Pumo7g01639 1391 PRINTS Disease resistance protein signature 1173 1189 - -
Pumo7g01639 1391 PRINTS Disease resistance protein signature 543 557 - -
Pumo7g01639 1391 PRINTS Disease resistance protein signature 468 483 - -
Pumo7g01639 1391 PRINTS Disease resistance protein signature 636 650 - -
Pumo7g01639 1391 ProSiteProfiles TIR domain profile. 109 281 IPR000157 GO:0007165
Pumo7g01639 1391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1001 1099 IPR027417 -
Pumo7g01639 1391 Gene3D - 985 1111 IPR027417 -
Pumo7g01639 1391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 695 IPR027417 -
Pumo7g01639 1391 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 152 260 IPR044974 GO:0006952
Pumo7g01639 1391 SUPERFAMILY Toll/Interleukin receptor TIR domain 270 413 IPR035897 -
Pumo7g01639 1391 Gene3D - 435 595 IPR027417 -
Pumo7g01639 1391 ProSiteProfiles TIR domain profile. 273 432 IPR000157 GO:0007165
Pumo7g01639 1391 Pfam TIR domain 148 262 IPR000157 GO:0007165
Pumo7g01639 1391 Pfam TIR domain 274 426 IPR000157 GO:0007165
Pumo7g01639 1391 SMART till_3 274 411 IPR000157 GO:0007165
Pumo7g01639 1391 SMART till_3 110 256 IPR000157 GO:0007165
Pumo7g01639 1391 SUPERFAMILY L domain-like 1094 1296 - -
Pumo7g01639 1391 Gene3D Ribonuclease Inhibitor 1112 1320 IPR032675 -
Pumo7g01639 1391 Gene3D Ribonuclease Inhibitor 778 955 IPR032675 -
Pumo7g01639 1391 FunFam Disease resistance protein (TIR-NBS-LRR class) 270 436 - -
Pumo7g01639 1391 Gene3D - 601 685 IPR042197 -
Pumo7g01639 1391 SUPERFAMILY Toll/Interleukin receptor TIR domain 151 258 IPR035897 -
Pumo7g01639 1391 SUPERFAMILY "Winged helix" DNA-binding domain 672 782 IPR036390 -
Pumo7g01639 1391 SUPERFAMILY RNI-like 785 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01639 Pumo-Chr7 42973062 43019102 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01639 446 951 WRKY Transcription Factor Family AT5G45050 31.286 2.98e-56 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01639 - - gmx:100796110 861.292