Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01612 ATGGCCACCACTCCCACAGCATACCAAGAGCACCTCCCAGCATCACCCCACTGGCTAAACAAAGGGGACAATGCATGGCAGCTAACAGCAGCAACTCTCGTGGGTCTCCAAAGCATGCCAGGCCTAGTGATCCTCTACGCCAGCATAGTGAAGAAGAAATGGGCAGTGAACTCCGCTTTCATGGCCCTCTACGCCTTCGCGGCGGTTCTAATCTGTTGGGTCCTCGTGGGTTACCGCATGGCTTTCGGGGACAGGCTCCTTCCCTTCTGGGGGAAGGGTGCCCCGGCACTGGGCCAGAAGTTTCTGGTCCAGCGAGCCAGGATCCCCGAAAGCATGCACCACTATAGGAATGGGACCGTTGAGAGTCCCACTTCTGAGCCCTTGTTTGCCATGGCTTCGCTTGTGTACTTTCAGTTCACGTTTGCGGCCATCACGGTTATCTTGCTGGCGGGATCGGTGCTTGGGAGGATGAATATTAAGGCGTGGATGGCTTTTGTGCCTCTTTGGCTCGTTTTTTCTTACACTGTTGGGGCTTTTAGTCTTTGGGGTGGTGGCTTTCTCTACCATTGGGGGGTTATTGATTACTCTGGCGGATATGTTATTCATCTTTCCTCTGGAATCGCTGGCTTCACTGCTGCTTACTGGGTTGGGCCAAGGTTGAAGAGTGACAGGGAGAGGTTCCCACCGAACAACGTGCTGCTTATGCTTGCGGGTGCTGGGTTGCTATGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCCAACATTGACGCTTCCATTGCTGTGCTCAACACTAACATTTGTGCTGCCACTAGTCTTCTTGTTTGGACCTCTCTTGATGTAATCTTTTTTGGCAAACCTTCGGTGATTGGAGCTGTTCAGGGCATGATGACTGGACTTGTTTGCATCACCCCAGGAGCAGGACTTGTGCAGTCTTGGGCGGCTATCGTAATGGGAATACTATCAGGGAGCATTCCATGGGTGACCATGATGATCCTCCACAAGAAGTCAACCCTTCTACAGAAGGTAGATGACACCCTAGGAGTGTTTCACACACACGCCGTGGCTGGCCTATTGGGTGGTCTCCTCACAGGTCTCTTGGCAGAACCTCAGCTCTGTAGACTCATATTGCCGGTGACCAACACAAGGGGTGCCTTCTACGGCGGCGGCGGCGGTGTTCAATTTTTGAAGCAATTGGTGGCAGCATGTTTCATCACTGGATGGAACTTGGTCTCCACCACGTTGATCCTTCTGGCCATACAGTTGTTCATACCCTTGAGGATGCCGAACGAGCAGCTCGAGATCGGCGACGACGCCGTCCACGGCGAAGAAGCCTATGCTCTTTGGGGTGATGGCGAGAAATATGACCCAACCAGGCATGGATCATCAAGAGTGGATAAAACTTCAGCATCTCCCCATGATAATGTAAAGGGAGCAAGGGGTTTGACCATAGATTTATGA 1470 0.5259 MATTPTAYQEHLPASPHWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVGYRMAFGDRLLPFWGKGAPALGQKFLVQRARIPESMHHYRNGTVESPTSEPLFAMASLVYFQFTFAAITVILLAGSVLGRMNIKAWMAFVPLWLVFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPQLCRLILPVTNTRGAFYGGGGGVQFLKQLVAACFITGWNLVSTTLILLAIQLFIPLRMPNEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSSRVDKTSASPHDNVKGARGLTIDL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01612 489 MobiDBLite consensus disorder prediction 460 489 - -
Pumo7g01612 489 FunFam Ammonium transporter 7 452 - -
Pumo7g01612 489 SUPERFAMILY Ammonium transporter 18 431 - -
Pumo7g01612 489 MobiDBLite consensus disorder prediction 460 476 - -
Pumo7g01612 489 Gene3D Ammonium transporter AmtB like domains 2 452 IPR029020 -
Pumo7g01612 489 Pfam Ammonium Transporter Family 25 449 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo7g01612 489 NCBIfam ammonium transporter 23 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pumo7g01612 489 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pumo7g01612 489 PRINTS Rhesus blood group protein signature 357 373 IPR002229 GO:0005886
Pumo7g01612 489 PRINTS Rhesus blood group protein signature 319 337 IPR002229 GO:0005886
Pumo7g01612 489 PRINTS Rhesus blood group protein signature 264 286 IPR002229 GO:0005886
Pumo7g01612 489 PRINTS Rhesus blood group protein signature 138 154 IPR002229 GO:0005886
Pumo7g01612 489 PRINTS Rhesus blood group protein signature 233 251 IPR002229 GO:0005886
Pumo7g01612 489 PANTHER AMMONIUM TRANSPORTER MEP2 10 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01612 Pumo-Chr7 41988590 41994610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01612 131 489 Inorganic Solute Cotransporters AT2G38290 77.159 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01612 K03320 - gmx:100798599 909.827