Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01603 ATGGGAGCACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCCATAACAAAATTGCTTTGGTCAAATATTCTCTGCTGGGTTCCATAATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCCTTGGTGGCCTTGCAAACCTTAGACAAGAACAGAAATATGACAGAAGACAGGCAGATATGAACTTGCTTATGCTGTTTGTGGCATTGCTGTGCCACTTGCTGCCAATGCTGTTTTATTATGATGGTGCCTCAGCAGGTGACCCTGCAGACTCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTGTTATGGTGATTGCATATTGTGCTTACCTTTTCTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCCCAGAATGAAGATAATGAAGATGGTGGCAATGATTCAGAAGAAGCAGTGATAGGATTCTGGAGTGGGTTTGCTTGGCTGGTTGGGATGACTGTGATGATTGCTTTGCTATCTGAATATGTGGTGCAAACAATTGAGGGTGCATCCGATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGCAATGCAACTGAACATGCAGGAGCAATCATATTTGGTTTCAAGAACAAACTGGACATCTCATTGGGTGTTTCCTTGGGTTCTTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTGGGTATCAAAATGGACCTTAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAATCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCATACTCTGCTACATTGTTATTGGGGCATGCTTTTTCGTACAAAGAACACCCCCCAACCAAACTAATGATTCCAACTACTTATCGCTTAAATCAGCATACTGA 966 0.4244 MGALLNATCGNATELIIAIFALSHNKIALVKYSLLGSIISNLLLVLGTSLFLGGLANLRQEQKYDRRQADMNLLMLFVALLCHLLPMLFYYDGASAGDPADSSLQLSRAASIVMVIAYCAYLFFQLWTHRQLFEAQNEDNEDGGNDSEEAVIGFWSGFAWLVGMTVMIALLSEYVVQTIEGASDSWGLSVSFLSIILLPIVGNATEHAGAIIFGFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWILGIKMDLNFNLLETGSLALAIIITAFTLQDGTSHYMKGLVLILCYIVIGACFFVQRTPPNQTNDSNYLSLKSAY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01603 321 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 304 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pumo7g01603 321 NCBIfam calcium/proton exchanger 1 300 - -
Pumo7g01603 321 Pfam Sodium/calcium exchanger protein 157 295 IPR004837 GO:0016020|GO:0055085
Pumo7g01603 321 Pfam Sodium/calcium exchanger protein 1 127 IPR004837 GO:0016020|GO:0055085
Pumo7g01603 321 NCBIfam calcium/proton exchanger 2 300 IPR004798 GO:0006816|GO:0015369
Pumo7g01603 321 Gene3D - 1 149 IPR044880 -
Pumo7g01603 321 Gene3D - 150 300 IPR044880 -
Pumo7g01603 321 FunFam Vacuolar cation/proton exchanger 145 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01603 Pumo-Chr7 40966859 40972365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01603 1 308 Antiporters AT2G38170 70.513 4.33e-149 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01603 K07300 - gmx:100782052 520.776