Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01602 ATGGATTCTCGAAACCAGGAGGCATCATGGGTGGTGATGGAGAATGGAGTTGGGAACAACAACGTGAAGGAGTTGAGCAAGGAAATGAGACATGGCAGAACCGCACATAACATGTCATCATCTTCGTTGCGCAAGAAATCAGACCTCACTCTTGTGTCTAAGGTTCAATCTGGCCCCCTCAGAAACGTGTTGGCGAATTTGCAAGAGGTTGTTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCTCTTGCCATTGTTGCTGAATGCTATGGCTTTAGAAGACCTTGGGTTTTTGCATTAAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGTTTCTTGACAGAACAAGTTGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCCACAGAGCTCATCATAGCAATTTTTGCCCTTAGCAATAACAAAATTGCTGTGGTCAAGTATTCTCTGCTGGGTTCCGTCATTTCTAACCTTCTTCTGGTTCTTGGCACCTCTCTATTCTGTGGTGGCATTGCAAACCTTAGACAGGAGCAAAAATATGATAGAAGACAGGCAGATATAAACTTGCTTATGCTGTTTGTGGCATTGCTATGCCAAATGCTGCCATTGCTGTTCCATTATGTTGGTGCCTCAGCAAGTGAAATTGCAGACTCAACTCTGCAGTTGTCAAGAGCTTCTAGCATTATTATGGTGACTGCATATGGTGCTTACCTTGTCTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCTCAGGATGAAGATGATGAAGAGGGTGGCAATGATTCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGAATGACTGTGATCATTGCTGTGCTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCCAATTCATGGAGTTTGTCTGTTAGCTTCCTCAGTATAATCTTGCTTCCAATAGTTGGCAATGCTGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAATAAACTGGACATCTCGTTGGGTGTTTCCTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTATGGGAATCAAAATGGACCTCAACTTCAACATCCTAGAGACAGGTTCTCTTGCTGTGGCAATAATAATCACAGCCTTCACATTACAGGATGGAACATCTCACTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTGTTATTGGGACATGCTTTTTTGTACAAAGAACACCCTCCTCCAACCAAAATAATGTTCCTAATATAACGCTTAAATCAGCAACTGAAGCAGTGTTTAGAGCTCAATAG 1371 0.4333 MDSRNQEASWVVMENGVGNNNVKELSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVQSGPLRNVLANLQEVVLGTKLSILFPAIPLAIVAECYGFRRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSVISNLLLVLGTSLFCGGIANLRQEQKYDRRQADINLLMLFVALLCQMLPLLFHYVGASASEIADSTLQLSRASSIIMVTAYGAYLVFQLWTHRQLFEAQDEDDEEGGNDSEEAVIGFWSAFAWLVGMTVIIAVLSEYVVQTIEDASNSWSLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWIMGIKMDLNFNILETGSLAVAIIITAFTLQDGTSHYMKGLVLVLCYIVIGTCFFVQRTPSSNQNNVPNITLKSATEAVFRAQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01602 456 FunFam Vacuolar cation/proton exchanger 273 429 - -
Pumo7g01602 456 Gene3D - 127 282 IPR044880 -
Pumo7g01602 456 NCBIfam calcium/proton exchanger 62 428 - -
Pumo7g01602 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 28 433 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pumo7g01602 456 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Pumo7g01602 456 Pfam Sodium/calcium exchanger protein 285 423 IPR004837 GO:0016020|GO:0055085
Pumo7g01602 456 NCBIfam calcium/proton exchanger 81 428 IPR004798 GO:0006816|GO:0015369
Pumo7g01602 456 FunFam Vacuolar cation/proton exchanger 127 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01602 Pumo-Chr7 40935260 40939580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01602 10 435 Antiporters AT2G38170 70.233 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01602 K07300 - gmx:100782052 756.518