Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01561 ATGTGTGTGTGTCCAAAGCGAGATCTCCACGCCTCCGCCAAAGCGCACACAAATCCATACATACTTTCACAGTGGCGGCAAATGGGTAGTGAAATTGGGAGCATTGACATTGGCCTGAGCGATGTCACAGTTGATCCTGAGTACTATGATGTAAACGTGTTGACAGAAAAGAGTGATGTGTATGGGTTTGGAGTTGTCCTGCTTGAACTTTTAACTGGAAAAAGAGCTCTGTTCTCGTTTGGAAAATTTACTAGAAGCACCCATTTTAATGTGGTAGACTTTGCAGTGCCTACTATTTTGGCTGGAGAGTTGATGCAAATTTTGGATCCAAGGGTTGGACCACCGGATGTGAATGAAGCGCAAGCACTGGAGCTATTGGCCAATACAGCTACCCATTGTGTGAATTTAGAAGGGAAAGACAGACCAGCCATGGCTCAAGTTGTGGTCAATTTGGAGAGGGCTTTGGCTATTTCCTATTTGTGA 483 0.4493 MCVCPKRDLHASAKAHTNPYILSQWRQMGSEIGSIDIGLSDVTVDPEYYDVNVLTEKSDVYGFGVVLLELLTGKRALFSFGKFTRSTHFNVVDFAVPTILAGELMQILDPRVGPPDVNEAQALELLANTATHCVNLEGKDRPAMAQVVVNLERALAISYL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01561 160 SUPERFAMILY Protein kinase-like (PK-like) 45 151 IPR011009 -
Pumo7g01561 160 Pfam Protein tyrosine and serine/threonine kinase 46 151 IPR001245 GO:0004672|GO:0006468
Pumo7g01561 160 Gene3D Transferase(Phosphotransferase) domain 1 15 158 - -
Pumo7g01561 160 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 44 157 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01561 Pumo-Chr7 39740070 39740782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01561 44 155 Receptor kinase-like Gene Family AT3G55950 58.621 2.90e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo7g01561 PK_Tyr_Ser-Thr 6.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01561 - - gmx:100805573 172.17