Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01545 ATGGAGGGTCATCATCTCCATCACCACCAAGTGCATCAACAACAAAGGGTTGTTCCTCAGCCTCAGAATATGAGTAGTGTCAACGTGGATGTGACTGATAGGTTTCCCCAATGGAGCATCCAAGAGACAAAGGAGTTCCTCGTGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGTTGTGGGAAGTCATCTCCAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGGTTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTCCCATTTTACAATGAGTTCAATGCGATTTTCACGGCAAGGATGCAGAGAATGGTGTGGGCTGAAGCCGAGGGTAGATCGAAGAAGAACAAGGTGGCGACGCCGCTCTCGTCCGATGAAGAAGAAGATGGCAATGAAGAGAGTACCGAAGCCCGTAGCGGCAGAAAGAAGAAGAAGGCGAAGATAGTTAGTGGTGGTGGCGGTCGTAGTGGTAGTTTGAACACTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAAATAGAAGCACAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAGGAAAGATGGAGAGAGAGGGAGGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATCACAGCTTTGCTAAACAAGCTAGAGAGGCAAGGAATGTAG 828 0.4807 MEGHHLHHHQVHQQQRVVPQPQNMSSVNVDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMVWAEAEGRSKKNKVATPLSSDEEEDGNEESTEARSGRKKKKAKIVSGGGGRSGSLNTLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQGM 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01545 275 Gene3D - 38 99 - -
Pumo7g01545 275 FunFam Zinc finger and SCAN domain-containing 20 38 99 - -
Pumo7g01545 275 Coils Coil 184 204 - -
Pumo7g01545 275 MobiDBLite consensus disorder prediction 1 22 - -
Pumo7g01545 275 MobiDBLite consensus disorder prediction 135 180 - -
Pumo7g01545 275 Pfam Myb/SANT-like DNA-binding domain 37 121 IPR044822 -
Pumo7g01545 275 CDD GT1 36 99 - -
Pumo7g01545 275 MobiDBLite consensus disorder prediction 135 149 - -
Pumo7g01545 275 PANTHER FI21293P1 22 271 - -
Pumo7g01545 275 ProSiteProfiles Myb-like domain profile. 38 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01545 Pumo-Chr7 39383785 39385187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01545 4 274 Trihelix Transcription Factor Family AT2G38250 56.786 1.03e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo7g01545 Myb_DNA-bind_4 4.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01545 - - gmx:100818384 411.764