Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01539 ATGGCAACCCAATTGAACAACAATGTGTTCAGAACATCAATTCTGAAGCACAAGATCCAATCAGAGACCCCTTTGACAATTTCACTTAGAACCCCAAGATTTCAAGTGATCAATGCAACATCCTCTACAAGCAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCAATATTGCCAAAAGATGCTTCCACAGCTATTGACTCTGAGGGCTTTGTTCTCCTTGATGTTAGGCCAGATTGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCCTTGCACGTGCCAATGTTTGTGGAGGACAAGGATAACAGCCCCATAACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGCTTGTGGACTGGCCAGTTCCTCACTACTTTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATTCCATTCCTGGTAAGGAGACCAAGCTTCTTGTGGCTTGTGGAGAAGGATTAAGGTCAATGACAGCAGCTTCAAAACTGTATAATGGAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGCTTTAATCGTTCAAAGAAAAATGACTTCCCAGCAGTAGAAGGAAAAGAGAAGCTGCAACATGCAACAATTGGGGGTGTTTCCTACATATTCCTTCAGTTGCTCATATTTCTAAAGGCTGTTGATTAA 663 0.4419 MATQLNNNVFRTSILKHKIQSETPLTISLRTPRFQVINATSSTSSARQLIESGTVRPILPKDASTAIDSEGFVLLDVRPDWEREKARVAGSLHVPMFVEDKDNSPITLLKKWVHFGYIGLWTGQFLTTLNSEFLSQVENSIPGKETKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKKNDFPAVEGKEKLQHATIGGVSYIFLQLLIFLKAVD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01539 220 ProSiteProfiles Rhodanese domain profile. 68 192 IPR001763 -
Pumo7g01539 220 SMART rhod_4 58 189 IPR001763 -
Pumo7g01539 220 FunFam Rhodanese-like domain-containing protein 10 55 199 - -
Pumo7g01539 220 Pfam Rhodanese-like domain 60 182 IPR001763 -
Pumo7g01539 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 219 IPR044614 -
Pumo7g01539 220 CDD RHOD 62 181 - -
Pumo7g01539 220 Gene3D - 55 201 IPR036873 -
Pumo7g01539 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 50 194 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01539 Pumo-Chr7 39205467 39207534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01539 33 207 Sulfurtransferasese or Rhodanese AT3G08920 62.286 8.01e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01539 - - gmx:100795945 396.356