Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01533 ATGGCTTCTTCTCGAAACCACGAGGCAGGGGTGGTGGTGGTGGTGGAGGTGGAGAATGGAGTAGGGAACAACAACAACGTGAAGGGGTTGAGCAAGGAAATGAGACATGGCAGAACCGCACATAACATGTCATCATCTTCGTTGCGCAAGAAATCAGACCTCACTCTTATGTCTAAGGTTCAATCTGGTCCCCTCAGAAACGTGTTGGCGAATTTGCAAGAGGTTATTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCCCTTGCCATTCTTGCTGATTGCTATGGCTTTGGAAGACCTTGGGTTTTTGTGCTGAGTTTACTCGGGCTTACCCCACTTGCTGAACGAGTCAGCTTCTTGACAGAACAAGTTGCTTATTACACTGGTCCTGCAGTGGGAGCACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCCATAACAAAATTGCTTTGGTCAAATATTCTCTGCTGGGTTCCATAATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCCTTGGTGGCCTTGCAAACCTTAGACAAGAACAGAAATATGACAGAAGACAGGCAGATATAAACTTGCTTATGCTGTTTGTGGCATTGCTATGCCACTTGCTGCCATTGCTGTTCCATTATGTTGGTGCCTCAGCAAGTGAAATTGCAGACTCAACTCTGCAGTTGTCAAGAGCTTCTAGCATTATTATGGTGACTGCATATGGTGCTTACCTTGTCTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCTCAGGATGAAGATGATGAAGAGGGTGGCAATGATTCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGAATGACTGTGATCATTGCTGTGCTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCCAATTCATGGAGTTTGTCTGTTAGCTTCCTCAGTATAATCTTGCTTCCAATAGTTGGCAATGCTGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAATAAACTGGACATCTCGTTGGGTGTTTCCTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTATGGGAATCAAAATGGACCTCAACTTCAACATCCTAGAGACAGGTTCTCTTGCTGTGGCAATAATAATCACAGCCTTCACATTACAGGATGGAACATCTCACTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTGTTATTGGGACATGCTTTTTTGTACAAAGAACACCCTCCTCCAACCAAAATAATGTTCCTAATATAACGCTTAAATCAGAAACTGAAGCAGTGTTTACAGCTCGATAG 1386 0.4372 MASSRNHEAGVVVVVEVENGVGNNNNVKGLSKEMRHGRTAHNMSSSSLRKKSDLTLMSKVQSGPLRNVLANLQEVILGTKLSILFPAIPLAILADCYGFGRPWVFVLSLLGLTPLAERVSFLTEQVAYYTGPAVGALLNATCGNATELIIAIFALSHNKIALVKYSLLGSIISNLLLVLGTSLFLGGLANLRQEQKYDRRQADINLLMLFVALLCHLLPLLFHYVGASASEIADSTLQLSRASSIIMVTAYGAYLVFQLWTHRQLFEAQDEDDEEGGNDSEEAVIGFWSAFAWLVGMTVIIAVLSEYVVQTIEDASNSWSLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWIMGIKMDLNFNILETGSLAVAIIITAFTLQDGTSHYMKGLVLVLCYIVIGTCFFVQRTPSSNQNNVPNITLKSETEAVFTAR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01533 461 FunFam Vacuolar cation/proton exchanger 278 434 - -
Pumo7g01533 461 Gene3D - 132 433 IPR044880 -
Pumo7g01533 461 FunFam Vacuolar cation/proton exchanger 132 276 - -
Pumo7g01533 461 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 34 438 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pumo7g01533 461 NCBIfam calcium/proton exchanger 67 433 - -
Pumo7g01533 461 Pfam Sodium/calcium exchanger protein 290 428 IPR004837 GO:0016020|GO:0055085
Pumo7g01533 461 Pfam Sodium/calcium exchanger protein 103 260 IPR004837 GO:0016020|GO:0055085
Pumo7g01533 461 NCBIfam calcium/proton exchanger 86 433 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01533 Pumo-Chr7 39080371 39113312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01533 21 440 Antiporters AT2G38170 69.860 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01533 K07300 - gmx:100782052 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00891 5 18588945 18591278 Pumo7g01533 7 39080371 39113312 PCT