Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01522 ATGGCAGGTCCAGAGATTGCTATTGGGAACTTCAATCCAAATGATACCAGGGGAAAGACCATTACTTGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTGTTCTTGTCCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCAATCTGCCACACCGATCTCAGTGCTTGGCAAGGCGAGAATGAGGCTCAACGTGCTTATCCTCGGATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGATGTGATTGACATGAAAGAAGGGGACTTGGTGGTGCCAATTTTCAATGGGGAATGTGGGGATTGCGAATATTGCAATTGCGAGAAGACCAACATGTGTGAGAGGTTTGGGGTGGATGCTATGAAGAAAGTGATGGCTAGTGATGGTGGCACAAGGTTTTCCACAATGGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCACAGAGTACACGGTGGTGGATTCGGCATGCGTCGTCAAGATTCACGTTGATGACGATGGCGACTTCAATCCCTACATCAAAAGACTCACCTTACTCAGTTGTGGCGTTTCTACGGGTGTTGGAGCTGCTTGGAATACTGCTAATGTGAATTTTGGTTCAAGTGTAGCTGTCTTTGGTTTAGGCGCAGTGGGTCTCTCTGTAGCAGAAGGGGCACGAGCCAGAGGCGCTTCCAAAATAATAGGCGTGGACATCAACTCTGACAAATTCATCAAAGCCCGAGCAATGGGCATCACTGACTTCATAAATCCAAGGGATGATGAAAGGCCAGTATACGAGAGGATCAGGGAAATGACTGGTGGGGGCGTGGACTATAGTTTTGAATGTGCTGGAAATTTAAACGTCCTAAGAGATGCCTTCTTGTCAGCTCATGAGGGTTGGGGATTGACTGTGATATTAGGGATTCATCCATCACCAAAATTGCTTCCCATCCACCCAATGGAGCTGTTCCAGGGTCGCAGAATAGTAGCATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCACTTGCCACAATTTGCCAGACAATGCATGCATGGAGTGGTGAAGTTAGATGATTTAATCACTCACGAGCTTCCAATCGAGGAGATAAACAAGGCCTTTGATCTTTTAACCGTCGGAAAGTCACTGAGATGTCTTCTACACTTCTAA 1197 0.4687 MAGPEIAIGNFNPNDTRGKTITCKAAVAYGPGEPFVVERVLVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQRAYPRIFGHEASGIVESVGEDVIDMKEGDLVVPIFNGECGDCEYCNCEKTNMCERFGVDAMKKVMASDGGTRFSTMDGKPIFHFLNTSTFTEYTVVDSACVVKIHVDDDGDFNPYIKRLTLLSCGVSTGVGAAWNTANVNFGSSVAVFGLGAVGLSVAEGARARGASKIIGVDINSDKFIKARAMGITDFINPRDDERPVYERIREMTGGGVDYSFECAGNLNVLRDAFLSAHEGWGLTVILGIHPSPKLLPIHPMELFQGRRIVASVFGGFKGKTHLPQFARQCMHGVVKLDDLITHELPIEEINKAFDLLTVGKSLRCLLHF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01522 398 Gene3D - 203 341 - -
Pumo7g01522 398 Gene3D - 26 393 - -
Pumo7g01522 398 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pumo7g01522 398 SUPERFAMILY GroES-like 348 398 IPR011032 -
Pumo7g01522 398 SUPERFAMILY GroES-like 16 184 IPR011032 -
Pumo7g01522 398 Pfam Alcohol dehydrogenase GroES-like domain 49 176 IPR013154 -
Pumo7g01522 398 PANTHER ALCOHOL DEHYDROGENASE 18 395 - -
Pumo7g01522 398 FunFam Alcohol dehydrogenase 6 26 215 - -
Pumo7g01522 398 FunFam S-(hydroxymethyl)glutathione dehydrogenase 203 341 - -
Pumo7g01522 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 362 IPR036291 -
Pumo7g01522 398 Pfam Zinc-binding dehydrogenase 226 345 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01522 Pumo-Chr7 38723108 38733743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01522 49 386 Monolignol Biosynthesis Gene Families AT2G21890 26.136 1.38e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01522 K00001 - gmx:100787307 757.673