Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01521 ATGGCAGGTCCAGATATTGCTATTGGGAACTTCAATCCAAATGATACCAGGGGAAAGACCATTACTTGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACATGTTCTTGTCCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCAATCTGCCACACCGATCTCAGTGCTTGGCAAGGCGAGAATGAGGCTCAACGTGCTTATCCTCGGATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGATGTGATTGACATGAAAGAAGGGGACTTGGTGGTGCCAATTTTCAATGGGGAATGTGGGGATTGCGAATATTGCAATTGCGAGAAGACCAACATGTGTGAGAGGTTTGGGGTGGATGCTATGAAGAAAGTGATGGCTAGTGATGGTGGCACAAGGTTTTCCACAATGGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCACAGAGTACACGGTGGTGGATTCGGCATGCGTCGTCAAGATTCACGTTGATGACGATGGCGACTTCAATCCCTACATCAAAAGACTCACCTTACTCAGTTGTGGCGTTTCTACGGGTGTTGGAGCTGCTTGGAATACTGCCAATGTGAATTTTGGTTCAAGTGTAGCTGTCTTTGGTTTAGGCGCAGTGGGTCTCTCTGTAGCAGAAGGGGCACGAGCCAGAGGTGCTTCCAAAATAATAGGCGTGGACATCAACTCTGACAAATTCATCAAAGGTAATTTTCTCTCATGTATATCTTTGATTCCACTCAGCTCTTTTATTCTTCTTTATAGTTGTTTTGAAAATCATAAAAGGATCAGGGAAATGACTGGTGGGGGCGTGGACTATAGTTTTGAATGTGCTGGAAATTTAAACGTCCTAAGAGATGCCTTCTTGTCAGCTCATGAGGGTTGGGGATTGACTGTGATATTAGGGATTCATCCATCACCAAAATTGCTTCCCATCCACCCAATGGAGCTGTTCCAGGGTCGCAGAATAGTAGCATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCACTTGCCACAATTTGCCAGACAATGCATGCAGTGGAGTAAGGACTACCATTCTTGGAATTTACATGTGTTCTTTAGTGTTCATTTTTCTACTTATTTCAAAAAAGGAATACCTCATATCACCTTTTCAAAAATGGAATAA 1206 0.4436 MAGPDIAIGNFNPNDTRGKTITCKAAVAYGPGEPFVVEHVLVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQRAYPRIFGHEASGIVESVGEDVIDMKEGDLVVPIFNGECGDCEYCNCEKTNMCERFGVDAMKKVMASDGGTRFSTMDGKPIFHFLNTSTFTEYTVVDSACVVKIHVDDDGDFNPYIKRLTLLSCGVSTGVGAAWNTANVNFGSSVAVFGLGAVGLSVAEGARARGASKIIGVDINSDKFIKGNFLSCISLIPLSSFILLYSCFENHKRIREMTGGGVDYSFECAGNLNVLRDAFLSAHEGWGLTVILGIHPSPKLLPIHPMELFQGRRIVASVFGGFKGKTHLPQFARQCMQWSKDYHSWNLHVFFSVHFSTYFKKGIPHITFSKME 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01521 401 Gene3D - 26 366 - -
Pumo7g01521 401 Pfam Zinc-binding dehydrogenase 226 350 IPR013149 -
Pumo7g01521 401 SUPERFAMILY GroES-like 16 184 IPR011032 -
Pumo7g01521 401 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pumo7g01521 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 365 IPR036291 -
Pumo7g01521 401 Pfam Alcohol dehydrogenase GroES-like domain 49 176 IPR013154 -
Pumo7g01521 401 Gene3D - 203 346 - -
Pumo7g01521 401 FunFam S-(hydroxymethyl)glutathione dehydrogenase 203 346 - -
Pumo7g01521 401 FunFam alcohol dehydrogenase 1-like isoform X1 31 202 - -
Pumo7g01521 401 PANTHER ALCOHOL DEHYDROGENASE 18 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01521 Pumo-Chr7 38693155 38702669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01521 49 130 Monolignol Biosynthesis Gene Families AT4G39330 39.759 8.10e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01521 K00001 - gmx:100787307 631.328