Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01516 ATGGCCACCGCAACAGCAGCGGCAACCTCCTCCTTCATGGGAACGCGCCTCCTGGAGGCGCATTCCGGATCGGGCCGGGTGCAGGCCCGGTTCGGGTTCGGGAAGAAGAAGAAGGCCGCTCCGAAGAAGGTGTCGAGGGGCTCCGGCTCCGACCGGCCCCTGTGGTACCCGGGCGCAAAGGCGCCCGAGTACCTCGACGGGAGCCTGGTCGGGGACTACGGGTTCGACCCGTTCGGGCTCGGGAAGCCCGCGGAGTACCTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAACGTGGCTGGAGACATTATCGGGACCAGGACTGAGGTTTCGGACGTGATTTCCACGCCGTTCCAGCCCTACAGGGAGGTGTTCGGGCTGCAGAGGTTCCGCGAGTGCGAGCTCATTCACGGAAGGTGGGCCATGCTTGCTACCCTCGGGGCTCTCACTGTTGAGTGGCTCACCGGAGTTACATGGCAAGACGCCGGGAAGGTGGAGCTAGTGGAAGGATCATCGTACCTTGGGCAACCACTTCCATTCTCAATCACCACACTGATCTGGATCGAGGTTCTCCTAGTTGGCTACATAGAGTTCCAGAGGAACGCAGAGCTCGACCCAGAAAAGAGGCTGTACCCAGGTGGCAGTTACTTTGACCCACTGGGCTTGGCCTCAGACCCAGAGAAGAAAGCCACTCTTCAATTGGCAGAGATCAAGCACGCACGTCTCGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCCGCCGCCACCGGCAAGGGCCCACTCAACAACTGGGCCACCCACTTGAGTGACCCACTCCACACAACCATCATTGACACCTTCTCATCCTCCTCTTAA 867 0.6067 MATATAAATSSFMGTRLLEAHSGSGRVQARFGFGKKKKAAPKKVSRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTEVSDVISTPFQPYREVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLLVGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01516 288 Gene3D Chlorophyll a/b binding protein domain 55 288 - -
Pumo7g01516 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 283 IPR001344 GO:0009765|GO:0016020
Pumo7g01516 288 SUPERFAMILY Chlorophyll a-b binding protein 47 285 - -
Pumo7g01516 288 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Pumo7g01516 288 MobiDBLite consensus disorder prediction 34 54 - -
Pumo7g01516 288 FunFam Chlorophyll a-b binding protein, chloroplastic 104 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01516 Pumo-Chr7 38620940 38623366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01516 13 287 Chloroplast and Mitochondria Gene Families AT3G08940 85.145 1.72e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01516 K08915 - gmx:100785180 544.658