Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01443 ATGATAGTTGCTATGGACTTGAATGCCTCGCCGGTCCCGGAGGAAGATGAAGATATTTTTGAGGAGAAGATACATGTTGAAGAGTTTCATGCACCTGAAGAACGCATAGAAACTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGGCTGAAGAGAGAACGACCAGATGATAGACCTGTACATGTGTCACAGTCACCTGGATACGATCAGCTATTTCATACTAAGAACCATAAATCATATGATAAAAGCAGGCTTCCTCCGGGGTGGTTGGATTGCCCTTCATTTGGCCAGGAAATTTGTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGACTGCATTCTTCCCGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCACTCGATACTATCCTGTGTCAGATTTAAAAAAAGAGTGCATCAAGCATGTTAAGATTCAATGCAGGGGGCGCGATTCTGTACCTGATAATTTATCTGTGAACCAGTTCGTCTATGAGGTTACACAATTTTTGTCACGTCAAAAGCACTCAAAGAAGTATATTCTTGTTCATTGTACACATGGACATAATCGTACAGGATACATGATCATCCACTATCTAATGCGTGCTATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGAAGCTCGCCCTCCGGGAATCTACAAACCTGATTACATTGATGCATTGTACACATTTTATCATGAGAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTCAATGGTGAAGCTGTTCCAGATGATGATGATGATGGAGTACCAGGCCCTGATTTGCAGGAGAACCATGAGACAGACACACGAATGACAAATGATGATGTTTTAGGAGATGAGATACCTACTGATCAGCAAGATGCATTGCGTCAGTTCTGTTATCAAACGCTTAAATTGGGTGTTGGGGCCAGGGGACACACACAATTTCCTGGTTCACACCCAGTTTCTCTCAACAGGTTGGATAATTTGCAATTGTTACGACAACGCTACTATTATGCAACATGGAAAGCAGATGGTACAAGATATATGATGCTAATAACAATGGATGGATGTTACTTGATTGATAGAAGTTTTAACTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGAAGTACAAATGATGGTTTGGGCGAGAAGACCCACCACTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATCTGATGGCAATCAACCAAGTATCAGTGATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCATGAACGACACCATATATATCAGAGCAGAAATCCTTACTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGACTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATACCTCGTACTCATGAAGGACTCTTGAAGTGGAAATATGCTTATCTGAATTCAGTTGATTTTCTTTTTGAGGTTGATGGTGATCGTGAGCTACTTTTTCTCTATGAACGGGGAAAGAAGAAACTCTTGGAAGGGAATAGGGTTGAATTCACAGATGGTTCAGATCCCTCAATTTATTCTGGAAAGATCATTGAATGTTCTTGGGATTTTGACAAACTGGAATGGAAGTTTATGCGAATCAGAACAGATAAATCAACTCCGAATGAGTTTAATACTTACAGGAAGGTGATGCGAAGCATAAGAGACAACATCACCGAGGAAGATTTGTTGAACGAAATAAGTGAGATAATTCGCCTTCCCATGTATGCCGACAGGATCAGAAATGATAGTAAAGCGAATCAGCATGCTAGTGTCGCAAGGCGAAGGTGA 2055 0.4068 MIVAMDLNASPVPEEDEDIFEEKIHVEEFHAPEERIETGADIARREREERKRRLKRERPDDRPVHVSQSPGYDQLFHTKNHKSYDKSRLPPGWLDCPSFGQEICCMIPSKVPLGESFNDCILPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKECIKHVKIQCRGRDSVPDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVPGPDLQENHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSLNRLDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGEKTHHFTLLDGEMVIDTLPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNHERHHIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAYLNSVDFLFEVDGDRELLFLYERGKKKLLEGNRVEFTDGSDPSIYSGKIIECSWDFDKLEWKFMRIRTDKSTPNEFNTYRKVMRSIRDNITEEDLLNEISEIIRLPMYADRIRNDSKANQHASVARRR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01443 684 Pfam mRNA capping enzyme, C-terminal domain 589 652 IPR013846 -
Pumo7g01443 684 MobiDBLite consensus disorder prediction 30 64 - -
Pumo7g01443 684 MobiDBLite consensus disorder prediction 300 317 - -
Pumo7g01443 684 Gene3D Protein tyrosine phosphatase superfamily 65 284 IPR029021 -
Pumo7g01443 684 Gene3D - 589 661 IPR012340 -
Pumo7g01443 684 SMART dsp_5 112 263 IPR020422 GO:0006470|GO:0008138
Pumo7g01443 684 FunFam mRNA capping enzyme family protein 85 299 - -
Pumo7g01443 684 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Pumo7g01443 684 MobiDBLite consensus disorder prediction 30 77 - -
Pumo7g01443 684 FunFam mRNA capping enzyme, putative 314 552 - -
Pumo7g01443 684 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Pumo7g01443 684 FunFam mRNA capping enzyme family protein 553 661 - -
Pumo7g01443 684 PIRSF mRNA_capping_HCE 75 684 IPR017074 GO:0004484|GO:0006370|GO:0140818
Pumo7g01443 684 Pfam mRNA capping enzyme, catalytic domain 355 554 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pumo7g01443 684 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0008138|GO:0016311
Pumo7g01443 684 ProSiteProfiles ATP-dependent DNA ligase family profile. 438 582 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Pumo7g01443 684 CDD Adenylation_mRNA_capping 326 555 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pumo7g01443 684 SUPERFAMILY Nucleic acid-binding proteins 558 669 IPR012340 -
Pumo7g01443 684 CDD RNA_5'-triphosphatase 92 258 - -
Pumo7g01443 684 PANTHER MRNA-CAPPING ENZYME 84 666 - -
Pumo7g01443 684 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 555 - -
Pumo7g01443 684 MobiDBLite consensus disorder prediction 285 317 - -
Pumo7g01443 684 Gene3D DNA ligase/mRNA capping enzyme 314 554 - -
Pumo7g01443 684 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Pumo7g01443 684 ProSiteProfiles Dual specificity protein phosphatase domain profile. 111 267 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01443 Pumo-Chr7 35668659 35682605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01443 1 684 Protein tyrosine phosphatase (PTP) family AT3G09100 68.841 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01443 K13917 - gmx:100776633 1355.5