Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01422 ATGGCGGGGAAAGTGGTGAAGGCAGCTTACGATGCAAAGATGCTGAAGCTTCTGAGAGAGTACAGTCAGGTGCTGGTGGTTTCATCGGACAATGTGGGTTGCAACCAGCTTCAGGGCATACGGAGGGGACTTAATGCTGATTCAATGGTGGTGATGGGAAAGAACTCCATGATGAAACGCTCTATCATCTTGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCATTAATTTTCACCAAAGGTGACTTGAGGGAGGTTAGCGAACAAATTGCCAAGTACAAGGTTGTTCAACCTATTCTCATGTGCCCCAAGTACACATCATATGACACATACCACAATTGTACCTATATGCAATCTGGACAGTTACCTTTGGGTCTCACGTGTTGTAATCAGCAATCTTCGCAGGCTTCTGAGCCGTTTCTTGTATGCTCAAAATTCTTGCCACACCAACATTGTTTCCTGATGAGATCAAGACAGTTCTTGATGACGAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGTAACTTGTGA 564 0.4574 MAGKVVKAAYDAKMLKLLREYSQVLVVSSDNVGCNQLQGIRRGLNADSMVVMGKNSMMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYDTYHNCTYMQSGQLPLGLTCCNQQSSQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPLLLLAGNL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01422 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Pumo7g01422 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 137 - -
Pumo7g01422 187 FunFam 60S acidic ribosomal protein P0 4 135 - -
Pumo7g01422 187 Pfam Ribosomal protein L10 7 104 IPR001790 -
Pumo7g01422 187 Gene3D - 4 125 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01422 Pumo-Chr7 35230113 35233847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01422 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 64.602 2.78e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01422 K02941 - mnt:21409050 154.836