Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01403 ATGATGGGAATGTTATTGCAGCTTCCTTATGTATTGTTTGGGGTACTTACTGCTGTGGTTCTGGTTCCAGCACAGGAGGATCAATCAGGATTCATTAGCATAGATTGTGGTCTACCTGAAGCTTCAAGCTATACTGAGAAGACCACAGGCATATTTTACATTTCAGATGCCCAATTTATAGATACTGGTGTAAGTAAGAGTATTTCACCTGCAGAGAAGAGTACTCATCAACAACAGCTAGCATATGTGAGGAGTTTTCCTAGTGGAGTGAGAAACTGTTACAGAATAAACGTAACAAGTGATACTAAATATTTAATCCGAGCCAGTTTCTTTTATGGAAACTATGATGGTCTAAATCAGCCCCCACAATTTGATCTTCATCTTGGACCTAATTTATGGGACACAGTGAAGTTCAACAAAAATGCATCACTCAGCACAATCAGTGACATCATTTACACTCCATCACTAGATTACATACATCCATGTCTGGTTAACACAGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGACTTTGAGCAATGCTTCCTATGTCACTGATTCCGCTGAATCATTGGCATGCATCCAGCGATATGATTTAGGATCTATCACCAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATCTGGGAGCCTCGTGGAATCAACAAGGGGACACAATTAAGCAGCACACTTAATTCTGGTGATCTATTATACCTGGATTATTATAAACCACCAGAAGTTGTCATGAGCACTGCCGCTGCACCAGTAAATGCTAGTGCTCCTTTAGAGTTCTATTGGGATCCAGATAATGTAAATGAGCAATTCTACATCTACATGTACTTTAGTGAGGTTGAAATTCTGGCAGCAAATGAAACTAGAACATTTAATATCTTGATGAATGGCAAGTTACTATATGGACCCCTGGCTCCTGTATATCAGGTGGCAACTACCATACTTACTGACTCAGCTTTGACTGGAGCCACAAGGTATCTATTTTCTCTTGTTAAGACAGAGATTTCTACCCTTCCACCCATCATTAATGCCGTGGAGATTTATAAAGTAATAGATTTTCCACAATCAGAAACTGAACAAGATGATGTTGATGCTATGACAAACATCAAAAACGCTTATGGGGTGGATAGAAATTGGGAAGGAGATCCATGTGGCCCAGTAGCATACATTTGGGAAGGTCTAAATTGTAGTTATGATGGTGATAACACCCGAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGGCAGATATCATTTTTCATCTCCGAGCTCACTATGTTACAGTACTTGGATTTGTCAAACAATAGTTTAACCGGGTCAGTACCTGATTTTCTGACGCAACTGCAATCACTTAAAGTCTTAAACTTGGGGAATAACAACCTTATTGGTCCAATTCCCAGAGGACTGGTTGAAAGATCAAAGGAAGGTTCACTTTCATTGAGCCTGGGGCAAAATCCAAATCTATGTGAATCTGATCCATGCATCCAGCAGACAAATAACAAGCAGCCAGATGCTGATCATCAGAAGAACAAAAATAATATAGTTATTCCGTTAGTAGCATCAGTTGCTGGAATTTTGGTGCTCCTAATAATTGTAGCAGCAGCTATAATCTGTGGCCCTAAAAAGAGAAAACCACAAGCATCTGTGAACATTGATGTTGAGACCAATACTCCAAATGGATCACAATTTGAACCCAAGCAACGGAAATATACATTCACTGATCTTGCTAAGATCACCAACAACTTCACTAGAATTCTTGGTAAAGGTGGATTTGGAGAAGTTTATCATGGATTTATTGATGACACTCAAGTAGCTGTAAAGATGCTTTCTCCATCAGCAGTACGAGGATATGAACAATTTCTAGCTGAGGTTAAACTTCTGATGAGAGTTCATCACAGAAATTTGACTTCTCTTGTTGGGTATTGCAATGAAGAAAACAATATAGGGCTCATGTATGAATATATGGCAAATGGAAATCTTGATGAAATTCTTTCAGGAAAAAATAGCAGGGTAAAGTTCTTGACATGGGAAGACAGACTCCGAATAGCACTGGATGCAGCCCAAGATGGGGGCAAACAAGTGTACACTGTTGTTGCTGGAACTCCCGGTTATTTGGATCCTGAGTACGGCACATCAAGCATGTTGACAGAGAAAAGTGACGTTTACAGCTTTGGGGTTGTTCTTTTGGAGATGGTGACTGGCGAGCCAGCAATTGCAAAAACGCCTGAGAAGACTCACATAAGTCAATGGGTTAGCTCCATGCTTTCTAATGGGGATATAAAAAATATTGCTGACTCAAGGTTTCAGGAAGATTTTGACACTGGCTCAGTCTGGAAAGTTGTTGAAATAGGAATGGCTTCTGTGTCCACTAGTTCTGCCAAAAGGCCAAGTATGAGCGATATAGTGAACGAGTTAAAGGAGTGTTTGAAGACAGAATTAGCTCGAAAATATAGTGGTCGTGACACTGAAAACAATGACTCAATTGAGTTGGTCACTCTGAATTTCACAACTGAACTTGGTCCCCCAGCTAGGTAG 2571 0.401 MMGMLLQLPYVLFGVLTAVVLVPAQEDQSGFISIDCGLPEASSYTEKTTGIFYISDAQFIDTGVSKSISPAEKSTHQQQLAYVRSFPSGVRNCYRINVTSDTKYLIRASFFYGNYDGLNQPPQFDLHLGPNLWDTVKFNKNASLSTISDIIYTPSLDYIHPCLVNTGKGTPFISAIELRTLSNASYVTDSAESLACIQRYDLGSITNLEYRYKDDVYDRIWEPRGINKGTQLSSTLNSGDLLYLDYYKPPEVVMSTAAAPVNASAPLEFYWDPDNVNEQFYIYMYFSEVEILAANETRTFNILMNGKLLYGPLAPVYQVATTILTDSALTGATRYLFSLVKTEISTLPPIINAVEIYKVIDFPQSETEQDDVDAMTNIKNAYGVDRNWEGDPCGPVAYIWEGLNCSYDGDNTRRITSLNLSSSGLTGQISFFISELTMLQYLDLSNNSLTGSVPDFLTQLQSLKVLNLGNNNLIGPIPRGLVERSKEGSLSLSLGQNPNLCESDPCIQQTNNKQPDADHQKNKNNIVIPLVASVAGILVLLIIVAAAIICGPKKRKPQASVNIDVETNTPNGSQFEPKQRKYTFTDLAKITNNFTRILGKGGFGEVYHGFIDDTQVAVKMLSPSAVRGYEQFLAEVKLLMRVHHRNLTSLVGYCNEENNIGLMYEYMANGNLDEILSGKNSRVKFLTWEDRLRIALDAAQDGGKQVYTVVAGTPGYLDPEYGTSSMLTEKSDVYSFGVVLLEMVTGEPAIAKTPEKTHISQWVSSMLSNGDIKNIADSRFQEDFDTGSVWKVVEIGMASVSTSSAKRPSMSDIVNELKECLKTELARKYSGRDTENNDSIELVTLNFTTELGPPAR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01403 856 ProSitePatterns Protein kinases ATP-binding region signature. 598 619 IPR017441 GO:0005524
Pumo7g01403 856 FunFam Leucine-rich repeat receptor-like protein kinase 569 666 - -
Pumo7g01403 856 Gene3D Transferase(Phosphotransferase) domain 1 700 841 - -
Pumo7g01403 856 Pfam Protein tyrosine and serine/threonine kinase 594 700 IPR001245 GO:0004672|GO:0006468
Pumo7g01403 856 SUPERFAMILY L domain-like 370 482 - -
Pumo7g01403 856 Pfam Leucine Rich repeats (2 copies) 437 477 IPR025875 -
Pumo7g01403 856 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Pumo7g01403 856 Gene3D Transferase(Phosphotransferase) domain 1 566 699 - -
Pumo7g01403 856 PRINTS Leucine-rich repeat signature 439 452 - -
Pumo7g01403 856 PRINTS Leucine-rich repeat signature 460 473 - -
Pumo7g01403 856 FunFam Leucine-rich repeat receptor-like kinase 370 503 - -
Pumo7g01403 856 SUPERFAMILY Protein kinase-like (PK-like) 576 822 IPR011009 -
Pumo7g01403 856 Gene3D Ribonuclease Inhibitor 372 494 IPR032675 -
Pumo7g01403 856 PANTHER OS07G0107800 PROTEIN-RELATED 32 821 - -
Pumo7g01403 856 Pfam Malectin-like domain 34 359 IPR024788 -
Pumo7g01403 856 ProSiteProfiles Protein kinase domain profile. 592 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01403 856 Pfam Protein kinase domain 704 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01403 Pumo-Chr7 34790003 34794790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01403 11 856 Receptor kinase-like Gene Family AT1G51800 45.967 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g01403 Malectin_like 5.5e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01403 - - gmx:100779474 1376.69