Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01386 ATGGGTTTTAAATCTTTCCTTAAATTGTGGTCTGAGGCCTTTAATTCTGAACATAGTAAAACAAATCATGGTCTATTTGGTGCAGGGGAGGCACAGCCAATGAAATGGGCCATGAGGTTGAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCTTACAGGATCTTGTTTGATCAGGATGCTAATCCCAGGTTGTCTTGCTTTGGACTCATGAAGAACAGTAGAGATGGCAAGAGTTACAGTACAAACCTGGCTTTCACCCCTCCTGAGTACTTAAGGACTGGTAGAGTGACTCCAGAGAGTGTGGTTTACAGTTTTGGAACTCTGCTGCTAGATCTCTTGAGTGGTAAACATATTCCACCAAGCCATGCACTTGACCTGATTCGTGGCAAAAACTTTCTGATGTTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCAAAGTCTCTTGTTGCATCTCTTATGTCACTTCAGAAAGAAACAGAGGTCCCCTCATATGTTCTGATGGGTCTCCGGCAAGAAACTGCATCCTCAACAAAGCAATTGTCATTGACACCTTTTGGTGAAGCATGTTTGAGAGTGGATCTTACTGCAATACATGAAATATTAGAGAAGACTGGTTACAGGGATGATGAAGGAATTGCCAATGAGCTCTCCTTTCAATTGTGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTAGAGCTAAAGACTTTGTCACTGCCATTGACTGCTACACTCAATTCATAGATGGAGGGACCATGGTTTCACCAACAGTGTATGCAAGGAGGTGCTTATCTTTTTTGATGAATGACATGGCACAAGAAGCTCTTGGAGATGCCATGCAAGCCCAAGCGGTATCTCCAGAGTGGCCTACTGCCTTGTATCTCCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGGACTAACATGGAAGCCAGAAAAAACAAAAACTGA 1122 0.4314 MGFKSFLKLWSEAFNSEHSKTNHGLFGAGEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQKETEVPSYVLMGLRQETASSTKQLSLTPFGEACLRVDLTAIHEILEKTGYRDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSFLMNDMAQEALGDAMQAQAVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEARKNKN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01386 373 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01386 373 Pfam Protein tyrosine and serine/threonine kinase 31 192 IPR001245 GO:0004672|GO:0006468
Pumo7g01386 373 Gene3D Tetratricopeptide repeat domain 265 373 IPR011990 GO:0005515
Pumo7g01386 373 SUPERFAMILY Protein kinase-like (PK-like) 33 202 IPR011009 -
Pumo7g01386 373 FunFam probable serine/threonine-protein kinase At5g41260 18 209 - -
Pumo7g01386 373 SUPERFAMILY TPR-like 269 362 IPR011990 GO:0005515
Pumo7g01386 373 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 30 372 IPR045845 GO:0004672|GO:0009742
Pumo7g01386 373 Gene3D Transferase(Phosphotransferase) domain 1 21 209 - -
Pumo7g01386 373 FunFam probable serine/threonine-protein kinase At4g35230 266 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01386 Pumo-Chr7 34469484 34474513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01386 33 192 Glycoside Hydrolase AT3G07070 34.595 4.18e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pumo7g01386 PK_Tyr_Ser-Thr 8.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01386 - - gmx:100814477 681.404